Paraburkholderia sabiae: QEN71_05110
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Entry
QEN71_05110 CDS
T09203
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psaa
Paraburkholderia sabiae
Pathway
psaa03420
Nucleotide excision repair
psaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEN71_05110
03430 Mismatch repair
QEN71_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaa03400
]
QEN71_05110
Enzymes [BR:
psaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEN71_05110
DNA repair and recombination proteins [BR:
psaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEN71_05110
MMR (mismatch excision repair)
Other MMR factors
QEN71_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WJZ75188
LinkDB
All DBs
Position
1:1119812..1122202
Genome browser
AA seq
796 aa
AA seq
DB search
MPELLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGFASPPTVLGVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTSDQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDASDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLSYNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGEHNAI
FAVGDDDQSIYAFRGANVGNMRDFESEFKVRNLIKLEQNYRSHGHILDAANHLIANNSRR
LGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIRALINTGLSRSEIAVLYRSNAQSRTI
EHTLVNVGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVTGKAGTSLGTFANLIAKMRAETAQMSLPETVEYVVRASG
LSEFYQNEREGQERLENLQELVNAATAFVSEEGYGLDTPARSIPLRPGATSAPELVVSTD
DPGVDVLDAANPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGGRSDNAAWGRDWFSRPDRQQGGGYQGGYQG
RESYATTNAPLPAFANEQRAADTGFRVGQQVFHTKFGEGTITALEGGGADAKALVKFKRH
GEKWLALAVAKLQAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgctcgcgaacctgaaccccgaacaacacgccgccgtcacgctgccgaac
gaaccggcgctcattctggcgggcgcaggcagcggcaagacgcgcgtgctgatcacgcgg
atcgcgtggctgatccagcaaggattcgcgtcgccgcccaccgtgctcggcgtcaccttc
acgaacaaggccgcgcgcgaaatgatgtcgcgcctgtcggcgctgctgcccatcgacacg
cgcggcatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcgcgcattac
cgcgacgcgggcctgccgcagacgttccagattctcgacacgtcggaccagctgtcggcc
atcaagcgcctgatgaagggcctgaatatcgacgacgagaaatatccggctaagaacctg
cagtacttcatcaacaacgcgaaggagcagggcctgcggccgaaagacgtcgacgcctcc
gacaacttcaaccgcaagttcgtcgaactgtatgaagcgtacgaccagcagtgccagcgc
gaaggcgtcgtcgatttccccgaactgctgctgcgctgctacgagctgctgtcgtacaac
ccgccgctgcgtgcgcattaccaggcgcgcttccgccacattctggtcgacgagttccag
gacacgaacaagctgcaatacgcgtggctgaaaatgctggccggcgagcacaacgcgatc
ttcgcggtcggtgacgatgaccagtccatctatgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaaagcgagtttaaggtccgcaatctgatcaagctcgaacagaattac
cgttcgcacggccatattctcgatgccgcgaatcatctgatcgcgaacaattcgcggcgt
ctcggcaagaatctgcgcacggacgcgggccacggcgagccggtgcgcgtctacgaagct
gcgacggattcgcaggaagcgggctggatcgtcgaagagattcgcgcgctgatcaatacg
ggcctgtcgcgcagcgagatcgccgtgctgtatcggagcaacgcgcaatcgcggacgatc
gaacatacgctcgtgaacgtgggcattccgtatcgcgtgtatggcggcctgcgcttcttc
gaacgccaggaagtgaagcacgcgctcgcgtatctgcgcctgatcgacaatccgaacgac
gacaccgcgttcgcgcgcgtcgtcaatttcccgacgcgcggcatcggcgcgcgctccatc
gaacagctggctgacgcggcgcgtctctacaactgctcgatggcggcggcgattccgtac
gtgacgggcaaggcgggcacgagcctcggcacgttcgcgaacctgatcgcgaagatgcgc
gccgaaaccgcgcagatgagcctgcccgaaacagtcgaatacgtggtgcgcgcgagcggc
ctgtccgagttctatcagaacgagcgtgaaggccaggagcggctggagaacttgcaggaa
ctcgtcaatgccgcgaccgccttcgtcagcgaagaaggctacggcctcgacacgcccgcg
cgttcgattccgctgcgtccgggtgcgacgtccgcgcctgaactggtcgtctcgaccgac
gatcctggcgtcgatgtgctcgatgccgcgaatcccgccgaccccgcgcaaaaccccgac
acgatgacgccgctcgcgggcttcctgtcgcacgcatcgctcgaagcgggcgacaaccag
gcgcaagccggccaggaagccgtgcagctgatgacggtgcacgcggcgaagggcctcgaa
ttcacggcggtgttcattacgggtctcgaagaagggctgttcccgcacgagaacagcgcg
atggagtccgatgggctcgaagaagagcgtcgtctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctatctgtcgttcgcgcagagccggatgctgcatggccagacgcgctac
aacatccgctcgcgtttcttcgacgaactcccgcaggaaacgctcaagtggctcacgccg
aaggtcgaagcgggcgcgcgctggggcggcggccgctcggacaacgccgcgtggggccgc
gactggttctcgcgcccggatcgtcagcagggcggcggctatcaaggcggctatcagggc
cgcgaaagctacgcgacgaccaacgcgccgctgcctgcgttcgccaacgaacaacgcgcg
gcggacacgggcttccgtgtcggacagcaggtgttccacacgaagttcggcgaaggcacg
atcaccgcgctcgaaggcggcggcgccgacgcgaaggcgctcgtcaagttcaagcggcac
ggcgagaaatggctcgcgctggccgtcgcaaaactgcaggcggtcgaatga
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