KEGG   Paraburkholderia sabiae: QEN71_06000
Entry
QEN71_06000       CDS       T09203                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
psaa  Paraburkholderia sabiae
Pathway
psaa02024  Quorum sensing
psaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QEN71_06000 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QEN71_06000 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psaa03019]
    QEN71_06000 (hfq)
   03036 Chromosome and associated proteins [BR:psaa03036]
    QEN71_06000 (hfq)
Messenger RNA biogenesis [BR:psaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QEN71_06000 (hfq)
Chromosome and associated proteins [BR:psaa03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QEN71_06000 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WJZ75355
LinkDB
Position
1:1330477..1330713
AA seq 78 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDSESS
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaagagcac
gtgccggtctcgatctatctggtcaacggcatcaagcttcaagggaacattgaatcgttc
gaccagtacgtcgtgttgctccggaatacggtaacccagatggtttacaagcacgccatt
tcgactgtcgtgcctgcccgtccggtgaatttccaccccgattccgaatcgtcctaa

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