Paraburkholderia sabiae: QEN71_23865
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Entry
QEN71_23865 CDS
T09203
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psaa
Paraburkholderia sabiae
Pathway
psaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEN71_23865 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaa03400
]
QEN71_23865 (uvrB)
DNA repair and recombination proteins [BR:
psaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEN71_23865 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEN71_23865 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
UB2H
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WJZ73158
LinkDB
All DBs
Position
1:complement(5313860..5315953)
Genome browser
AA seq
697 aa
AA seq
DB search
MSEHHLSEVNDALDESKFVTYEGSPFRLYQPYPPAGDQPTAIETLVEGVEDGLSFQTLLG
VTGSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDKLGQRDVIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EIDTLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKSELRDRLEFFYNDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPTDAMMFLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTAGQVAEQVVRPTGLVDPEIAVRPARTQVDDVLAEINERVAAGDRVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKITDSMKRAIDETERRRAKQMAFNE
ERGIVPRGVVKRIKDIIDGVYNVDEARAELKEQQVRAKFEDMSEKQLAKELKRLEKQMME
HAKNLEFEKAAQMRDQLALLRQRVFGANVGDHLTGTN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacatcatctgagtgaagtcaacgacgctctcgacgaatccaaattcgtgacg
tacgagggctccccgttccggctctatcaaccgtatccgcccgcgggcgaccagccgacg
gcgatcgagacgctcgtcgaaggcgtggaggacgggctgtcgttccagacgctgcttggt
gtgacgggctccggcaagacttacacgatggcgaacacgatcgcgcggctgggccggccg
gccatcgtcttcgcgccgaacaagacgctcgccgcgcagctgtacgcggagttccgcgag
tttttcccgcgcaacgcggtcgagtacttcgtctcgtactacgactattaccagccggaa
gcgtacgttccgcagcgcgacctgttcatcgagaaggactcgtcgatcaacgagcacatc
gagcagatgcgtctgtcggccacgaagagtctgatggagcggcgcgatgtcgtgatcgtc
gcaacggtgtcggcgatctacggtatcgggaatccgtcggaatatcaccagatgattctg
acgctgcgcacgggcgacaagctggggcagcgcgacgtcatcgcgcgtctgatcgcgatg
cagtacaaccgcaacgaagccgatttccagcgcggctcgttccgtgtgcgtggcgatacg
atcgatattttcccggccgagcacgccgaaatggccgtgcgcgtcgaactgttcgacgac
gagatcgacacgctccaactgtttgacccgctcaccgggcgcgtgcgtcagaagattccg
cgttttaccgtgtatccgtcgtcgcactatgtgacgccgcgtgagaccgtgatgcgcgcc
gttgagacgatcaagtccgaactccgagaccgtcttgagtttttctacaacgacggcaag
ctcgtcgaagcccagcggctcgaacagcgcacgcgcttcgatctggaaatgctgcaggaa
ctgggcttctgcaagggcatcgagaactactcgcggcacttctcgggcgccgcgcccggt
gagccgccgccgacgctcgtcgactatctgccgacggacgccatgatgttcctcgacgag
tcgcacgtgctgatcggccagttgaacggcatgtacaacggcgaccgcgcgcgtaaggaa
aatctcgtcgactatggcttccggctgccgtccgcgctggacaaccggccgctcaagttc
aacgaattcgagcgcaagatgcgccaggtcgtgttcgtgtctgcgacgcccgccgattac
gagaagaagacggcggggcaggtggccgagcaggtggtccgtccgacgggtctcgtcgat
ccggaaatcgccgtgcggccggcgcgcacgcaggttgacgacgtgctggccgagatcaac
gagcgcgtggccgcgggcgaccgcgtgctcgtcacggtgctgaccaagcggatggcggag
caactgaccgagttcctcgccgatcacggcgtgaaggtgcgctatctgcacagcgacatc
gataccgtcgagcgcgtggaaatcatccgcgacctgcggctcggcacgttcgacgtgctg
gtcgggatcaacctgctgcgcgaaggtctggacattccggaggtctcgctggtcgcgatc
ctcgacgccgacaaggaaggcttcctgcgcgccgagcgctcgctgatccagacgatcggc
cgggcggcgcgtaacgtgaacggcaaggcgattctctacgccgacaagatcacggattcg
atgaagcgcgcgatcgacgaaaccgaacggcggcgcgcgaagcagatggccttcaacgag
gagcggggcatcgtgccgcgcggcgtggttaagcggatcaaggacatcatcgacggcgtg
tacaacgtcgacgaagcacgcgccgaactgaaggagcagcaggttcgtgcgaagttcgaa
gacatgtctgaaaagcagctcgccaaggaactgaagcggcttgagaaacagatgatggag
cacgcgaaaaatctcgaattcgaaaaggcggctcagatgcgggatcagctcgcgttgctg
cgtcagcgcgtattcggcgcgaatgtcggcgatcatctgacgggcacgaactag
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