Paraburkholderia sabiae: QEN71_27130
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Entry
QEN71_27130 CDS
T09203
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
psaa
Paraburkholderia sabiae
Brite
KEGG Orthology (KO) [BR:
psaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psaa03016
]
QEN71_27130
Enzymes [BR:
psaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QEN71_27130
Transfer RNA biogenesis [BR:
psaa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QEN71_27130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
WJZ73770
LinkDB
All DBs
Position
1:complement(6050958..6053048)
Genome browser
AA seq
696 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPTAGELMEQADVV
AQDIDLDFLWECAPEDEFPFATLGADYFGDTFGPVERAALILRMHGSPIYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQQGYEDEMKAGRLPDGFQSKALGLLTKPDKNSIEYKA
LEAAAAARGISAARLMLECGGIPSARALHEARFLSEFFPHGTGFPPVTVGELPEDLPQAE
VEAFSIDDVTTTEIDDAFSVEHLSDGRVRIGIHIAAPALGIERGDAVDAIARGRLSTVYM
PGDKITMLPDGVVDRFTLAEGGLRPALSLYSIVNRETQEIVASETRAELVYVKNNLRHNT
LDELVTEDALANGTGEYPHKEDIAVLWPFAQALFEKRQVARAGYGLKREVQRNTDYNFYV
DGEHISITPRRRGSPLDTIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKRTR
MQTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFA
VVQGFDDTYTAYADHQRRMEYFWCLRWLTQENRKQVAASVVKGDLVRLEEVPLLLHVPGL
GVHARGTRLMLDVMSVDELTVEASVRLLHVIDAPTVTSGTEEEEEADEEIIDATDESAES
EAEAKAEADTEGAAEGEQAADQQNNDSTQHATEQGQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggtagtttcaaggcgggcagcgtgctgtcgcgtcaa
ggcgacgcgtttcaggtcgaactgccgggcggacgccgcgcgaaggtccgcgcgaaagac
gtgctgatcgagttcgacaagccgacggcgggcgagctgatggaacaggccgacgtcgtc
gcgcaggacatcgatctggacttcctgtgggaatgcgcgcccgaagacgagtttccgttt
gcgacgctcggcgccgactatttcggcgacaccttcgggcccgtcgaacgcgccgcgctg
attctgcgcatgcacggctcgcccatctatttccgtcgcaaggggcgcggccagtatcag
cgcgcgccggaagagcagctgaaaatggcgctcgcgtcgctcgaacgcaaacgccagcag
gcgctcgtgcagcagggctacgaagacgaaatgaaggcgggccgtctgcccgacggcttc
cagagcaaggcgctcggtctgctgacgaagcccgacaagaattcgatcgaatacaaggcg
ctcgaagcggcggcggcggcgcgcggcatttcggcggcgcgtctgatgctcgaatgcggc
ggcattccgtcggcccgcgcgctgcacgaagcgcgcttcctgtcggaattcttcccgcac
ggcaccggtttcccgcctgtcacggtcggcgaattgccggaagatctgccgcaagcggaa
gtcgaagcgttttcgatcgacgacgtgacgacgactgaaatcgacgatgcgttctccgtc
gagcatctgtccgatggccgcgtgcggatcggcattcacatcgccgcgccggcgctgggc
atcgaacgcggcgacgccgtcgatgcaatcgcgcgcggccgtttgtccacggtctacatg
ccgggcgacaagatcacgatgttgcccgacggtgtagtcgaccgcttcacgcttgccgaa
ggcggcttgcgtccggcgctgtcgctgtacagcatcgtcaatcgcgagacgcaggaaatc
gtcgcgagtgaaacgcgcgccgaactcgtctacgtgaagaacaatctgcgccacaacacg
ctcgacgaactggtgacggaagacgcgctcgccaacggtacgggcgagtatccgcacaag
gaagacatcgcggtgctgtggccgttcgcgcaggcgctgttcgagaagcgtcaggtcgcg
cgcgccggttacggcctgaagcgcgaagtgcagcgcaatacggactacaacttctacgtc
gacggcgagcacatctcgatcacgccgcgccgccgcggttcgccgctcgacacgatcgtc
gccgaactggcgattctcgcgaactcgacgtggggcgcgttcctgcacgatcacggcgtg
ccgggcatctatcgttcgcagcgcgcgttcggcgcgccgacgggcccgaagcgcacccgc
atgcagacgacggccgcgccgcacgaaggcctcggcgtcgcgcagtacgcgtggagcacg
tcgccgctgcgccgttacgtcgacctcgtcaatcaatggcaactgatcgcgtgcgtgcag
cacggcgtgacggcgaagctcgccgcgccgttcaagccgaaggacgctgatctgttcgcc
gtcgtgcaaggtttcgacgatacgtacaccgcgtacgccgatcatcagcgccgcatggag
tatttctggtgtctgcgctggctcacgcaggaaaaccgcaagcaggtcgcggcgtctgtc
gtaaagggcgatctggtgcgtctcgaagaagtgccgttgctactgcatgtgccgggtctc
ggcgtgcacgcgcgcggcacgcgactgatgctcgacgtgatgtcggtggatgagctgacg
gtcgaagcgtccgtgcgcctgttgcacgtgatcgacgcgccgaccgtgacgagcggcacg
gaagaagaggaagaggccgacgaagaaatcatcgacgccaccgacgaatccgccgaaagc
gaagccgaagccaaggccgaagccgacacggaaggcgcggcggaaggcgagcaagctgcc
gatcagcagaacaacgactcgacgcagcacgcgacggagcaaggccaatga
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