Paraburkholderia sabiae: QEN71_30225
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Entry
QEN71_30225 CDS
T09203
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psaa
Paraburkholderia sabiae
Brite
KEGG Orthology (KO) [BR:
psaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psaa03000
]
QEN71_30225
Transcription factors [BR:
psaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
QEN71_30225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
HTH_30
AAA_5
HTH_23
PAS_4
HTH_28
HTH_29
P22_Cro
HTH_Tnp_ISL3
AAA
HTH_1
HTH_7
AAA_2
HTH_22
AAA_16
NUMOD1
HTH_50
AAA_7
HTH_17
nSTAND3
AAA_22
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WJZ78272
LinkDB
All DBs
Position
2:complement(130814..132805)
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AA seq
663 aa
AA seq
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MRNDAQTIGSLTARESGWLTPSIQKAHERSETFGLSASMCPDYDVLTHGELRMKLEQNRV
LCAHATPVMETLREQIANTQSMIVLTDAEGLILHSIGDDDFLRRAEKVALKAGANWAEER
QGTNAIGTAIAERSATVVHGDQHYLAANRFLTCSSVPILDPYGDLVGVLDVTGDHRSYHQ
HTMALAKMSVQMIENHLFANTFRNTLQIAFHGRAEFLGTLMEGIMAFTCDGRFLSANRSA
QFQVGLPLAAMRAHTLSSLFGLTTPQLIDRLRASLGHHITLDLNNGTVVCANVEFRRPTL
GGEGSWPGGESAVGTRPATARTQPVRSAPVVNAPSRLDSLDTGDPQISTVIAKVRKVLGK
NIPILITGETGTGKELLAQAIHNDSPRRAGPFVAVNCASIPENLIESELFGYEEGAFTGA
RRKGAVGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERVVDPLGSSKSVPVDIAIICA
THRNLREMIVQNRFREDLYYRLNGLVVKLPPLRERTDLAVVIERMLQSMPCDETEGAPLR
VTSDVMALFEECAWPGNFRQLGNLLRTAAAMVDDDGELRREHLPEDFFDDLRSGAALGAR
SAGATLPLMSTRLQDVQASAIAAAVARHNGNVSAAARALGISRNTVYRKMPSLCAGANPH
GDD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgatgcccagactatcggatcactgacagcccgagagagcggctggctcact
ccgtcgattcagaaagcgcacgagaggtcggaaacgttcggactcagtgcgtcgatgtgc
cccgactacgacgtgctcacgcacggcgaattgcggatgaagctcgaacagaaccgcgtg
ctgtgcgcgcacgcgacgcccgtgatggaaacgctgcgcgagcagatcgcgaatacgcaa
agcatgatcgtgctgacggacgccgaaggtctgattcttcattcgatcggcgatgacgat
ttcctgcgccgcgccgagaaggtcgcgctcaaggcgggcgccaactgggccgaagagcgg
caaggtacgaatgcgatcggcaccgcgatcgccgagcgcagcgccaccgtcgtgcacggc
gatcagcactatctcgccgcgaaccgtttcctgacctgctccagcgtgccgattctcgat
ccgtatggcgatctggtcggcgtgctcgacgtgacgggcgaccaccgcagctatcatcag
cacacgatggcgctcgcgaaaatgtccgtgcagatgatcgaaaaccatctgtttgcgaac
acgttccgcaacacgctgcagattgcctttcatggccgcgctgagtttctcggcacgctg
atggaaggcatcatggccttcacgtgcgacgggcgctttctgtccgcgaatcgcagcgcg
cagtttcaggtcgggctgccgctcgccgcgatgcgcgcgcacacgctgtcgtcgctgttc
gggctgaccacgccgcaactgatcgaccggctgcgcgcgagcctcggtcatcacatcacg
ctcgatctgaacaacggcacggtagtttgtgcgaacgtcgagtttcggcggccaacgctc
ggcggcgaaggttcgtggccgggcggcgaatctgccgtcggcacgcggcctgccaccgcg
cgcacgcagcctgtgagaagcgctcccgttgtcaacgcaccgtcgaggctcgacagtctc
gacacaggcgatccgcagatttccaccgtcatcgccaaggtgcgcaaggtgcttggcaag
aacattccgattctgatcacaggcgaaacgggcaccggcaaggaactgctcgcgcaggcc
atccacaacgattcgccgcgtcgcgcgggcccgttcgtcgcggtcaattgcgcgtcgatc
ccggagaatctgatcgagtcggaactgttcggttacgaggaaggcgcgtttacgggcgcg
cgccgcaagggcgcggtcggcaagctgctgcaggccaatggcggcacgctgtttctcgat
gaaatcggcgacatgccgtatccgctgcaggtgcgtctgctgcgcgtgctacaggaacgc
gtcgtcgatccgctcggctccagcaaatccgttcccgtcgatatcgcgatcatttgcgcg
acgcaccgcaatctgcgcgaaatgatcgtgcagaaccggttccgcgaggatctgtattac
cgtttgaacggtctcgtcgtcaaactgccgccgttgcgcgagcgcacggacctcgccgtc
gtgatcgagcggatgttgcagtcgatgccatgcgacgaaacggagggcgcgccgctgcgt
gtcacgtccgacgtcatggcgctgttcgaggagtgcgcatggcccggcaacttccggcaa
ctcggcaatctgctgcgcacggcggccgcaatggtcgacgacgacggcgaactcaggcgc
gaacatctgcccgaagatttcttcgacgatctgcgcagcggcgcggcgctcggcgcacgg
tcagcgggcgcgacgttgccgctgatgagcacgcggcttcaggatgtgcaggcttccgcg
attgcggcggccgtcgcgcggcacaacgggaatgtgtcggcggctgcgcgggcgctcggt
atttcgcgcaatacggtgtatcggaagatgccttcgttgtgcgctggtgcaaacccgcac
ggcgatgattag
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