Paenibacillus sabinae: PSAB_01275
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Entry
PSAB_01275 CDS
T03064
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03420
Nucleotide excision repair
psab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSAB_01275
03430 Mismatch repair
PSAB_01275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_01275
Enzymes [BR:
psab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSAB_01275
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSAB_01275
MMR (mismatch excision repair)
Other MMR factors
PSAB_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
AAA_12
DUF6953
Motif
Other DBs
NCBI-ProteinID:
AHV95193
UniProt:
X4ZRV9
LinkDB
All DBs
Position
complement(286050..288608)
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AA seq
852 aa
AA seq
DB search
MNKLLFHPVPPGASGTRVPRAAAASAKTSRELVRGEEPDAGYFRTLEQGGILLNASQIAA
VRHGDGPLLTLAGAGSGKTSVLVCRTGYLLSVRRVSPGRLLLLTFSSRAAAEMRERIGRL
PGISGMGLSGLQARTFHSFFLYVLRRQGVMQEIFHDTRRQHILLKSIMRELGLPKDAYPP
ESLLSLLSACKMNMGDADTLPDLTNADKEIKEILKRYEQWKRDNGKIDFDDVLLHAYQML
LERPELLAELQRTYQYIMVDEFQDTNLLQYELIRMIARPHGNLMVVGDDDQTIYSFNGAR
SDFILEFEQVYPEAKVITLDINYRSGPAIIGLGNGIIRGNTRRRAKTLRSAAPEGVPPRY
LRPYTADEEAEAVVEYIASAVEQGARSYGDFAVLYRASSSSRAVLERLLIQGIPYIDYGE
GRLLYEHWLISPVVSYLRLTVNRRDFAAIENMLPTLYVGREQGMAHIHRMEAAQPKQGPL
IHLLSLPGLADFRQTAIRERLDMLRHLRELTPLQAIRQIRSRFYDSFVLADERHQATLHR
ETLKEMLDELELSAGRFGSIPLFLDFIDDVMSRNEHHRQPSGTGQGDRVALMTIHKSKGL
EFPVVLLLGASEGILPHSSALEAGRLKDRQTAEGGGEALALLEEERRLAYVAVTRAKEEL
LVSSPALHRGRKAPVSRFMLAAFGAAEAAGAAAASAPGGRSGGGVARHGRTSGTAGGAGE
PAGRSGYGGSADRHGRTGGTAGGAGEPASRGSYGGGADRHGRTGDAAGGAGESAGRSGHG
GGVDRHGRVSGAAGGAGEPAGRTRTVAVWSCPSAACPGWMRVKTGGAEDHLAHKPCPLCG
TPMERGTRDVPV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctgctgtttcatccggttccgccgggagcctccggaacccgcgtcccgcgg
gcggcggccgcttcggcgaagacgagccgggagctggttcgcggagaggagccggacgcc
ggctatttccggacgctggagcaaggcggcatcctgctgaacgcctcacagatcgcggcg
gtacggcatggtgacggaccgctgctgacgctggcgggcgccggctccggcaagacgagc
gtactggtctgccggacaggctatttattgtccgtgcgccgcgtttcgcccggacgcctg
ctgctgctgacgttctccagcagggcggctgcggaaatgcgggagcggatcggcaggctg
cctggtataagcggaatggggctttcggggcttcaggcccgcacgttccattcttttttc
ctgtatgttctgcggaggcagggggtcatgcaggagattttccacgacacgcgccgccag
catattctgcttaaatcgatcatgcgcgagctcggcctgcccaaggacgcctacccgccg
gaaagcctgctttcccttctgtccgcctgcaaaatgaacatgggcgacgcggatactctc
cccgatcttacgaatgcggacaaggaaatcaaggagattctaaagcgctacgagcagtgg
aagcgggacaacggcaaaatcgatttcgacgacgtgctgctgcacgcctaccagatgctg
ctcgaacggccggagctgcttgcggagctgcaaagaacttatcaatatattatggttgat
gaatttcaggatacgaacttgctgcagtacgagctgatccgcatgatcgcgcggccgcac
ggtaatctgatggtggtcggagacgacgaccagacgatctattcgttcaacggggcgcgg
agcgattttattctcgaattcgagcaggtatacccggaagccaaggtcatcacgctcgac
atcaactaccgctccggccccgccatcataggcctcggcaacggaattatccggggcaac
acgcggcggagggccaagacgctgcgctcggcggcgccggaaggcgttccgccccggtac
ctccgcccctatacggcggatgaggaagcggaagccgtcgtggagtacatcgcttccgcc
gtggagcagggagcgcggagctacggcgattttgccgtactgtaccgggcatcgagcagc
agccgtgccgtgctggagcgcctgctgatccaaggcatcccatacattgactatggcgaa
ggccggctactgtatgagcactggctcatttcgccggtcgtcagctatttgcggctgacg
gtgaaccggcgggatttcgccgccatcgagaatatgctgcctacgctctacgtcggcaga
gagcagggaatggcccatatccaccggatggaggcggcgcagccgaagcaggggccgctg
atccacctgctgagcctgcccggtctggccgatttccgccagaccgccatcagggagcgg
ctggacatgctccggcatctgcgggagctgacaccgctccaggccatccggcagatccgc
agccggttctatgattccttcgtgctggcggacgagcgccatcaggcgacgctgcaccgg
gagacgctgaaggaaatgctggacgagctggagctgtcggcggggcgattcgggagcatt
cccctttttcttgatttcatcgacgatgtgatgtccaggaacgagcatcaccggcagccc
agcggaaccgggcagggcgaccgcgttgcgctgatgacgatccacaagtccaaagggctg
gagttccccgttgtcctgctgctcggcgcgtccgagggcatcctgccgcacagctcggcg
ctggaggcgggccgcctgaaggaccgccagaccgcggagggcggcggagaagcgctggcg
ctgctggaggaggaacgccgcctggcgtatgtggcggtcacccgcgccaaggaagagctg
ctggtcagctcgcctgcgctgcaccggggccggaaggccccggtgtcccgcttcatgctg
gcggcgttcggcgccgccgaggctgcgggagcggcggcagcctcggcgcctggcggccgg
tcaggcggcggcgtagcccgccatgggcgcaccagcggcacggcgggcggggccggggaa
ccggccggccgcagcggttacggcggcagcgcagaccgccatgggcgcaccggcggcacg
gcgggcggggccggggaaccggccagccgcggcagttatggcggcggcgcagaccgccat
gggcgcaccggcgacgcggcgggcggggccggcgaatcggccggccgcagcgggcatggc
ggcggcgtagaccgccatgggcgcgtcagcggcgcggcgggcggggccggggaaccggcc
ggccgcacgcgcacggtcgcggtctggagctgcccttccgccgcctgcccgggctggatg
cgcgtcaagactggcggcgccgaggaccatctggcgcacaagccctgcccgctgtgcggc
acgccgatggagaggggcacccgggacgttccggtgtag
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