Paenibacillus sabinae: PSAB_05065
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Entry
PSAB_05065 CDS
T03064
Name
(GenBank) 60 kDa chaperonin Protein Cpn60; groEL protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSAB_05065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psab03019
]
PSAB_05065
03110 Chaperones and folding catalysts [BR:
psab03110
]
PSAB_05065
03029 Mitochondrial biogenesis [BR:
psab03029
]
PSAB_05065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psab04147
]
PSAB_05065
Enzymes [BR:
psab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSAB_05065
Messenger RNA biogenesis [BR:
psab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSAB_05065
Chaperones and folding catalysts [BR:
psab03110
]
Heat shock proteins
HSP60 / Chaperonin
PSAB_05065
Mitochondrial biogenesis [BR:
psab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSAB_05065
Exosome [BR:
psab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSAB_05065
Exosomal proteins of other body fluids (saliva and urine)
PSAB_05065
Exosomal proteins of breast cancer cells
PSAB_05065
Exosomal proteins of colorectal cancer cells
PSAB_05065
Exosomal proteins of bladder cancer cells
PSAB_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHV95949
UniProt:
X4ZW39
LinkDB
All DBs
Position
1157461..1159089
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALIREGLKNVTAGASPIGLRKGID
KAVKAAVAELQKISKPIENKQSIAQVAAISAADEEVGQLIAEAMEKVGKDGVITVEESRG
FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLDNPYILITDKKISSTQEILPLLEKIVQ
QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT
EKLGLDLKSATVDQLGNARQVRVTKENTTIVDGSGAKEDIQARVSQIRAQLEETTSEFDK
EKLQERLAKLSGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGTALVNV
YGAVAAVEATGDEKTGVNIVLRSLEEPIRTIAANAGQEGSVIVERLKKEEIGVGYNAATD
EWVNMIEAGIVDPAKVTRSALQHAASVAGLFLTTEAVIADKPEPEKGGAPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatatcaagttcagtgaagacgcccgccgcgcaatgctgcgtggggtagac
gctttggcaaacgcggttaaagtaacgctcggaccaaaaggccgcaacgtggtactggag
aagaaattcggcagcccgctgatcacgaacgacggcgttaccatcgccaaagaaatcgaa
ctggaagacgccttcgagaacatgggcgctcaactggttaaagaagttgctaccaagaca
aacgacgtagccggtgacggtacgacgactgcaactgttctcgctcaagcgctgatccgt
gaaggtctgaagaacgtaacggccggcgccagcccaatcggtctgcgcaaaggtatcgac
aaagcggttaaagcggctgtagccgaactgcaaaagatctccaaaccgatcgaaaacaaa
caatccatcgctcaagttgcggctatctccgcagccgacgaagaagtaggtcaactgatc
gccgaagctatggaaaaagtgggcaaagacggcgtaatcaccgttgaagaatcccgcggc
ttcctgaccgagcttgaagtggtggaaggtatgcagttcgaccgcggctacatctccccg
tacatgattaccgatacggacaaaatggaagctgtgctggataacccttacatcctgatc
accgataaaaaaatcagcagcacgcaagaaatcctgccgctgcttgaaaaaatcgtacaa
caagccagaccgcttgttatcatcgccgaagacatcgaaggcgaagctcaagcgatgctg
atcgtgaacaaactgcgcggaacattcaacgctgttgccgttaaagctcctggctttggc
gaccgccgcgaagcgatgctgcaggacattgccgctctgaccggcggccaagtcatcacc
gagaagctcggtcttgacctgaagagcgcgactgtcgatcagctcggtaacgcccgtcaa
gtgcgcgtaacgaaagagaacacaaccattgttgacggaagcggcgcgaaagaagacatt
caagcacgcgtcagccaaatccgtgcccaactggaagaaacaacttccgagttcgacaag
gagaagctgcaagagcgtctggcgaagctgtccggtggcgtagccgttgtcaaagtcggc
gctgctaccgaaaccgaactgaaagagcgcaaactgcgcattgaagacgccctgaacgct
acccgcgctgcggtagaagaaggtatcgtatccggcggcggcaccgcgctggttaatgta
tatggcgccgtagccgctgttgaagcgacaggcgacgagaagaccggcgtgaacatcgtg
ctccgctccctggaagagccgatccgcacgatcgctgcgaacgctggccaggaaggctcc
gttatcgttgagcgcctgaagaaggaagaaatcggcgtaggttacaacgccgctaccgac
gagtgggtcaacatgatcgaagccggtatcgtcgaccctgcgaaggtaacccgctccgcg
ctgcagcacgctgcatccgtagccggcctgttcctgaccaccgaagctgttatcgccgac
aagccggagcctgaaaaaggcggcgcgcctgacatgggcggcatgggcggtatgggcggc
atgatgtaa
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integrated database retrieval system
