Paenibacillus sabinae: PSAB_11055
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Entry
PSAB_11055 CDS
T03064
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psab
Paenibacillus sabinae
Pathway
psab00300
Lysine biosynthesis
psab00470
D-Amino acid metabolism
psab01100
Metabolic pathways
psab01110
Biosynthesis of secondary metabolites
psab01120
Microbial metabolism in diverse environments
psab01230
Biosynthesis of amino acids
Module
psab_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSAB_11055 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSAB_11055 (dapF)
Enzymes [BR:
psab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSAB_11055 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AHV97139
UniProt:
X4ZZS2
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All DBs
Position
2445124..2445960
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AA seq
278 aa
AA seq
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MEFTKMHGLGNDFIVVFGEKSLPDNAAELAVKLCNRFFGIGADGLVYILPSERGDFMMRI
INSDGSEAEQCGNAIRCVAKYVYDHGHVQSEEIVIVTIGAGEQKVKLKVTDGKVETVTVD
MGEPVLSGPQIPVNIDAEPVLGQPIETDGKEFTFTAVSMGNPHCVIYVDDAVSFDLTTWG
PKLEVHPLFPRKVNVEFATVKDRGHIDMRVWERGAGPTLACGTGACATLVSSVLNGVSDR
AAWVSLKGGDLFIEWNEEDNHVYMTGPAEAVFKGSVSI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaccaaaatgcatggactcggcaatgactttatcgtcgtattcggcgagaaa
tcgctgccagacaacgcagcggaactggccgtcaaattatgcaaccggttcttcggcatc
ggagccgacggactcgtatatattctgccctcggaacgcggggacttcatgatgcggatt
atcaattcggacggttccgaagcggaacagtgcggcaacgccatccgctgcgtggcgaaa
tatgtgtatgatcacggccatgtgcagtcggaggaaatcgtcattgtaacgatcggcgcg
ggcgaacagaaggtaaagctgaaggttacggacggaaaggtggagactgtaacggtcgac
atgggcgagcctgtactgtcaggtccgcaaattccggtgaatatcgacgctgagcctgta
ctggggcagccgattgagacggacgggaaggaatttacctttaccgccgtttcgatgggc
aatccgcactgcgttatttatgtggacgacgccgtatcctttgatctgacgacttgggga
ccgaagcttgaggttcatccgctgttccctcgcaaggtgaatgtcgaattcgccaccgta
aaagaccgcggacacatcgacatgcgggtatgggaacggggagccgggcctacgctggct
tgcggaacaggtgcttgcgccacgctcgtctcctccgtcctcaacggagttagcgaccgg
gcagcctgggtaagcctgaagggcggagacctgttcattgaatggaacgaggaagacaat
cacgtctacatgacgggaccggcagaggcggtattcaaagggtccgtatccatctaa
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