Paenibacillus sabinae: PSAB_11110
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Entry
PSAB_11110 CDS
T03064
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSAB_11110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_11110
Enzymes [BR:
psab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSAB_11110
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSAB_11110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
PIF1
Flavi_DEAD
Zn_ribbon_6
AAA_16
nSTAND_NTPase5
AAA_19
SLFN-g3_helicase
Zn_ribbon_ISL3
AAA_30
WHD_PriA_bact
TrwB_AAD_bind
DAP3
T2SSE
AA9
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
AHV97150
UniProt:
X4ZKB6
LinkDB
All DBs
Position
2456043..2458592
Genome browser
AA seq
849 aa
AA seq
DB search
MDIAKVIVDVPVRSTDRTFDYSIPESFKVWIEVGSRVAVPFGHRTVQGFVVSLESGDIRT
IKGIKPIQEVLDLVPPLSPELVELADWISERYACRRISALQAMLPTALKGKAERLISLGD
AEPEPVNEEETLFPDEEWFPIFLGTGGEEKEIADFVRRGGEVSMRQLTRAFPDGAETIKF
MLRRGVLRESQSIKDKMGKKKLKAVDLAMEPESAREALSKLPARSARQKEVLSFLIDMEA
VLPMPLKDVLSALQVTAGTVKGLEDKGLIEITEVEVYRDPYRGRDFKPSDPLPLTGEQQA
VFDRIIGAVEQQRHEVFLLHGVTGSGKTEIYLQCIQRCVEQGRQAIVLVPEISLTPQMVE
RFKGRFGSGVAVMHSRLSSGERYDEWRKIREGKASVAVGARSAVFAPFSNLGLIIMDEEH
ETSYKQEENPRYHARDVAVRRAMLGDAAVILGSATPSLESYYAARSKSDDLFSPVLLEMP
SRALGNQLPAVQIVDMREELKEGNRSMFSRALHSAIQSRLERGEQTVLLLNRRGFSTFVM
CRSCGYVAGCPECDISLTYHSRSNNLRCHYCGHAEPAPEICPECGSEHIRFFGTGTQRVE
EELGKLFPGIRVIRMDVDTTTEKGSHEKLLGQFRDKKADVLLGTQMVAKGLDFPDVTLVG
VITADSALNLPDFRAAEKTFQLLTQVAGRAGRHTLPGEVLVQSYTPDHYSIVHASRHDYA
SFIKDELKHRKALHYPPYCRLILVTVSHEQMPVALRMAENYAMNIQGKARQRRWFGSLDK
LTADGLDLLGPVASPLPRLKGRYRFQCMVKWRGAIDAIGLAREVAEELEDSLRDPVLQLS
IDVDPQMLM
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgccaaggttatcgtcgatgttcccgttcgaagcaccgaccgaaccttcgat
tattcgattcccgagtcttttaaagtatggattgaggtgggcagccgggtggctgttcct
ttcgggcaccggacggtgcagggctttgttgtatccctggaatccggcgatatacggacg
attaagggaatcaagccgattcaggaggtgctcgatctcgttccgccgctctctccggag
ctggtagagctggcggactggattagcgagcgttacgcctgccgcaggatttctgcgctg
caggctatgctgccgacggcgcttaagggcaaagccgaacggcttatttcgcttggcgac
gcggaaccggaaccggtaaatgaagaggaaaccttgttccccgatgaagaatggtttccc
atcttcctgggtaccggcggggaggagaaagagatcgccgacttcgttcgtcggggaggc
gaggtgtcaatgagacagctgacccgggcctttccggacggagcggagacgatcaagttc
atgctgcggcggggcgtgctgagggaaagccagtcgatcaaggataaaatgggcaaaaaa
aagctcaaagcggtcgatctggccatggagccggaatccgcccgtgaagcgctcagcaag
cttcccgccagatccgcccgccagaaggaagtgctgtcgttcctgatcgatatggaggca
gtgctccccatgccgctcaaggatgtcctgtctgcactgcaggtgacagccggtacggta
aagggacttgaagacaaaggtctgattgaaattacggaagtggaagtctatcgtgatcct
taccgggggagagactttaagccgagcgatccgctcccgctaactggtgagcagcaggcc
gtattcgatcggattattggcgcggttgagcagcagcgtcatgaagtctttctgctgcac
ggggtaacgggcagcggaaagacggaaatttatcttcagtgcatccagcgatgcgtcgaa
cagggacgccaggccatagtccttgttcctgaaatttcgctgacaccgcagatggtggaa
cgcttcaagggccgattcggcagcggggtcgcggtcatgcacagccgtttgtcctccggg
gagcgatatgacgaatggcgcaaaatccgcgagggcaaagcgtctgttgcggtcggggcc
cgctcggcggtatttgctccttttagcaatctgggcctgatcattatggacgaagagcat
gaaacctcctacaagcaggaggagaatccgagataccatgcgcgggatgtggccgtccgc
cgggcgatgcttggcgatgcggccgtcatcctcgggtcggcgacgccttcgctggagagc
tattacgctgcacggtccaagagcgacgatcttttctcaccggtactgctggagatgccg
agccgggcgctgggcaaccagcttccggcggttcaaatcgtggacatgcgcgaggagctg
aaggaaggcaaccgctccatgttcagccgcgctcttcactcggcgattcagagcagactg
gagcggggagagcagacggtgctgctgctgaaccgaagaggcttctcgacctttgtgatg
tgccgaagctgcggttacgtcgcgggctgtcccgaatgtgacatttcactgacctatcac
agccgcagcaataatttgcgatgtcattactgcggtcatgcggagccggctccggagatc
tgcccggaatgcggcagcgaacatatccgcttcttcggaacgggaacgcagcgtgtagaa
gaagaactgggcaagctgtttccgggaatccgggtcattcggatggatgtcgacacgacg
accgagaaaggctcgcacgagaagctgctcggacagttcagggacaaaaaagccgacgtg
ctgctgggcacgcaaatggtagccaaagggcttgattttcccgatgtgacgctggtgggc
gtcatcaccgcggactcggcgctgaatcttccggatttccgtgcggcagagaagacgttt
caacttctcacacaggtcgccggacgggcgggacggcacacacttccgggagaggtgctg
gtccagtcctacacgcctgaccattattccatcgttcatgccagccggcatgactatgct
tcttttataaaggatgaactgaagcaccgcaaagcgcttcactatccgccctattgcaga
ctgattctggtgacggtgtctcatgagcagatgccggtggcgctgcggatggcggagaac
tacgcgatgaatattcagggcaaagcccgtcagcgccgatggttcggaagtctcgacaag
ctgacggccgatggactcgatcttctgggccctgtcgcctccccgctgccccggctaaaa
ggtagataccgcttccagtgtatggtgaagtggcgcggagccatcgacgccattggactg
gcccgcgaggtagcggaggagctggaggattcgcttcgcgacccggtgcttcaattaagt
attgacgtcgaccctcaaatgttgatgtag
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