Paenibacillus sabinae: PSAB_14520
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Entry
PSAB_14520 CDS
T03064
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSAB_14520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psab03019
]
PSAB_14520
03016 Transfer RNA biogenesis [BR:
psab03016
]
PSAB_14520
Enzymes [BR:
psab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PSAB_14520
Messenger RNA biogenesis [BR:
psab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSAB_14520
Transfer RNA biogenesis [BR:
psab03016
]
Prokaryotic type
tRNA degradation factors
PSAB_14520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
KH_N4BP1_2nd
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AHV97813
UniProt:
X5A081
LinkDB
All DBs
Position
complement(3179046..3181142)
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AA seq
698 aa
AA seq
DB search
MSKHVEMQLGGRTLVLETGRLAKQANAAVMVRYGDTSVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD
CSPEIAAMIGTSAALSISDVPFNGPIGGVVVGRINGQFVVNPTIAQQEESDIYLVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHEEIRAIVAKIEELVQIAGKEKMTVKLHAVNVDVN
TEVRAYAQERLVEAVKIAEKHARQDAIDAVNNDTVEHFTEKYIETPELIGDVKEVLHDIV
KEEVRRLITHDKVRPDGRKLNEIRPIDCDTSLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGIDLTETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIDGIDRKILEEALEQAKEGRLFILSKMMEAI
SKPRESLSPYAPKIIIMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
EEMIKKARSIIEGIVREVEVGEIYVGTVKRIEKFGAFVEILPGKDGLVHISQLSTDRVGK
VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTAEAKA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacatgtagaaatgcagctcgggggcagaaccctggtgctggaaacaggccgc
ctcgccaagcaggcgaacgcagccgttatggtccgctacggtgatacgtcggtgctctgt
acggtgacggcttcaagcgagccgaaggatttggacttttttccgctcaccgtaaactat
gaggaacgtttgtacgcggtcggtaaaattccaggaggcttcataaagcgcgaaggcaga
ccgagcgaaaaagcgattttgtccagccgtctgaccgaccgtccgattcgtccgctgttc
ccggaaggcttccgtaatgacgtgcaggtgctgaacctcgtaatgagcgtcgatcaggat
tgctcgccagaaatcgcagctatgatcggaacgtcggcggcgctgagcatttccgatgtg
ccgttcaacggtccaattggcggtgtcgttgtcggccgaattaatggccagtttgtcgtt
aacccgacgatcgcccaacaggaagagagcgacatctatctcgtcgtggccggtacgaaa
gacgccatcatgatggtggaagcggaagcgaatgaagtgccggaagaagttatgctggaa
gcgatcatgttcgggcatgaagagatccgcgccattgtagcgaagattgaagaactggtg
cagattgccggcaaggaaaaaatgaccgtgaagctgcacgccgttaacgtggatgtgaat
accgaagtacgcgcttatgcgcaggagcggctggttgaagcggttaagattgccgagaag
catgcccgccaggatgcgatcgacgcagtcaataacgatacggtggaacacttcacggaa
aaatatatcgaaacgccggagctgattggcgacgtgaaggaagtgctgcacgatatcgtc
aaggaagaagtccgtcgtctgattacgcacgacaaggttcgtccggatggccggaagctg
aacgagattcgtccgattgactgcgatacgtcgctgcttccgcgcacgcacggctcggga
ctgttcacacgcggccagacgcaggctctcagcgtatgtacgctcggcgcgctcggcgat
gtgcagattctcgacggcatcgatttgaccgaaacgaaacggttcatgcaccactataac
ttcccgccgttcagcgtaggggaagcccgtccgcttagagcgccgggacgccgtgaaatc
ggtcatggagcgcttggtgaacgcgcattgtccaaggtaattcctagcgaaactgaattc
ccgtacacgatccgcctcgtatccgaggtgctggaatcgaacggttcgacttcccaggcg
agcatttgcgcaagtaccctggcgatgatggatgcgggcgttccgattaaagccccggtt
gccggtgtggcaatgggtctgattaaagacggcgagcatgtatccatcctgactgacatt
cagggcatggaagaccatctcggcgatatggacttcaaagtggccggtactgctgaaggc
gtaactgccattcaaatggatatcaagatcgacggcatcgaccgcaaaatcctggaggaa
gcgcttgaacaggctaaagaaggccggctgtttattttgagcaaaatgatggaggctatt
tccaaaccgagagagagcctttccccttatgcgccgaagattatcatcatgcagatcaat
ccggacaaaatccgcgatgttatcggcgcaggcggcaaaatcatcaacaagatcatcgaa
gagaccggcgtgaagatcgacatcgagcaggacggccgcgtattcatcgcttcttcgaat
gaagagatgatcaagaaagcgcgttccatcatcgaaggcatcgtgcgcgaggttgaagtc
ggcgaaatttatgtcggcaccgtcaagcggattgagaaattcggagctttcgtggaaatt
ttgccgggcaaggatggtttggtgcatatttcgcagctgtcgactgaccgagtaggcaaa
gtagaagacgtggttgccatcggtgataccatcaccgttaaagtgaccgaaatcgaccag
cagggccgcgttaacctgtcgcgcaaggccgttttgaccgcggaagccaaagcgtaa
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