Paenibacillus sabinae: PSAB_17740
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Entry
PSAB_17740 CDS
T03064
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
psab
Paenibacillus sabinae
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_17740
Enzymes [BR:
psab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSAB_17740
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PSAB_17740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AHV98446
UniProt:
X4ZFZ1
LinkDB
All DBs
Position
complement(3837648..3841151)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSVTFLIGRSGSGKTTKIWNAICSALREDPLGPPIIQLVPEQGSFSAEQGLLGACDVRGS
LRAQTLSFPRLSYRVKQETGGRGSVPIGDEGKKMLLYKILSRRKEELKLFGASSDRPGFV
DQLSRLHAELKRCCLGASDLEEQISRLTESAGRSPILVGKLADLKLVFGDLEKEMSHLYM
DEEDRLAELAELIPNSSFVKGSTIFVDGFRGFTAREFTVLRQLMLHAADITVALTLDRPF
LGVNRPHELDLFHPSASAYIKLRGMAEELGAEVWDEMLSPSVLPRFAEAPALAHLERGFD
RRLAYRGPEPAEEEITIRAAVNKRAEIEGALREMMRLAREQGAKYGEMAVFVRKLEDYDY
LVPALFRDYGVPFFLDRKEGELHHSLVEFIRSALDIVRRRWRYEDVFRCIKTGFLLPADG
SLTRDDMDTLENYVLACGIQGYRWTDKNYKWKAIPSLSLEGGGKTDNRLVPLMEACREAV
TGPLIAFERRIKRSRSGGDLCRTVFELLEDTSAPRKLEYMSAAALEEGRTQDAREHRQLW
GAILDLLDQIVEMMGDEALSFDIFAGILETGLAELRMGLVPPSLDQVLVGTMDRTRTTGV
KYAFLLGFNEGVVPALIQEDGVLSETERSFLEGAGMELAPGASRKMLDERFLIYNALTSA
SRKLWISYACTDDEGKSLLPSEVVRHLRRMYPEVAEHPLHSLPVSAPPEEHREFIGNPKQ
SLRMLIVQLRQWKQGQNIPAVWWEVYNWFADNAEWRPDLQTLTGSLFYRNAGAPLRRETS
LRLYGGSTLRGSVSRMEKFVSCPFSHFASYGLRLKERQLYKLQAPDIGQLFHAALSSMAA
KLRDEGRSWGAMTPDECRMEAGKTVDMLSPMLQGEILLSSKRYGYISRKLKNIVGRASVI
LGEHARRGSFDIAFLELDFGPGKPLPPLRIELPNGCLMEVVGRIDRVDTAEGENGILLRV
IDYKSSRKDLKLHEVYYGLSLQMLTYLDVLLTYAEEWLGEPAFPAGTLYFHVHDPLLSSA
NGMNLEQAQQELLKRFKMKGLLMADREVVSLMDTSLDKGHSSIVPVAIKSDGSFYSSASV
ATPEQWGRLLSSVRGTITEIGTRITEGDVAITPYRIQQETACTFCSYRAVCQFDEAVEGN
GFKHLGKPGKEAIWEMLSRQDEGGNRP
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaacgtttctgatcggccgctcgggcagcggcaagacgacgaaaatatggaat
gcaatctgttccgctctgcgcgaagatccgctcggccctccgattattcagctcgttccg
gagcagggctcctttagcgctgagcaagggctgcttggcgcctgcgatgtccgggggagc
ctgcgcgcgcagacgctgagctttccgcgcctttcctaccgggtgaagcaggaaactggc
ggccggggcagcgtaccgatcggcgatgaaggcaagaagatgcttctttacaagattttg
agccgccgcaaggaggagctgaagctgttcggcgcctcgtcggaccgcccgggtttcgtg
gaccaattgagccggctgcatgccgagcttaagcggtgctgtctcggcgcatcggatctg
gaagagcagatttcccggctgacggaatctgcgggtagaagtccgatccttgtggggaag
cttgcggatctgaagctcgttttcggcgatctggagaaggagatgtcccatctgtatatg
gatgaagaagaccggctggccgagcttgcggagctaattcccaactcctcgttcgtaaag
ggctctaccattttcgtagacggcttccgggggtttacggcccgcgaatttacggtgctg
cgccagctaatgcttcatgccgccgatatcacggtcgcgctgacgcttgaccggccattt
ttaggcgttaaccggccccatgagctggatctgttccatccatcggcctcggcttacatt
aagctgagagggatggcggaagagctgggcgcagaagtctgggatgaaatgctgtctcct
tcggtgctgccgcgttttgcggaggcccccgctctggcgcatctggagcggggctttgac
cgcaggctggcgtaccggggaccggagcccgcggaagaggagattacgatccgggcggcc
gtgaacaagcgggcggagattgaaggcgcactgcgcgagatgatgaggcttgcccgggag
caaggagcgaagtacggtgaaatggccgtgttcgttcgcaagctggaggattacgattac
cttgttcctgcgcttttccgcgactatggcgtcccgttcttcctcgaccgcaaggaaggc
gagctgcatcattcgctggtggagtttatccgttcggcgctggacattgtccgccggcgc
tggcggtatgaggacgtgttccggtgcatcaagacgggtttcctgcttcctgcggacggc
agcctgaccagggacgatatggacactctggaaaactacgttctggcctgcggcattcaa
ggctaccgctggacggacaagaattataaatggaaggcgatcccgagcctgtcgctggaa
ggcggaggaaagacagacaacagactggtgccgctgatggaagcttgcagggaggcggtg
accggtccgctgatagcttttgaacggcgaatcaagagaagccgcagcggcggggactta
tgcaggacggtatttgagctgctggaagatacctccgctccccggaagctggaatatatg
agcgccgccgcattggaagaaggaagaacgcaggacgcccgagagcaccggcagctgtgg
ggcgctatccttgatctgctggatcagatcgtcgagatgatgggcgatgaagctttaagc
tttgacatcttcgccgggattctggagacggggcttgccgagctgcggatgggccttgtt
cctccatcgctggatcaggtgcttgtcgggacgatggaccggacccggacaacgggtgtc
aaatacgccttcttgcttggtttcaacgaaggggtcgtaccggcgcttattcaggaggac
ggtgttctgtccgagacggagcgttccttcctggaaggagcgggcatggagcttgctccg
ggcgcttcccgcaaaatgctggacgagcgcttcctgatctataacgcgctgacatcggct
tcccgcaagctgtggatcagctacgcctgtacggatgacgaaggcaagtctctgcttcct
tcggaggttgtccgccatctgcgccggatgtacccggaggtcgccgagcaccctctgcac
agccttccggtgtcggcaccgcctgaggagcaccgcgaattcatcggcaatccgaagcag
agtctgcgcatgctcatcgtacagctgcgccagtggaagcagggacagaatatcccggcg
gtctggtgggaggtctacaactggtttgcggataacgcggagtggcgcccggacctgcag
acgttgaccggctcgctgttttaccgtaatgccggagctccgctcagacgcgagacgagt
ctgcggctatatggcggctccacattgcgcggaagcgtctcgcgcatggagaaattcgtc
tcctgcccgttctcccatttcgcctcctacggcttgcgcctcaaggagcgccagctttat
aagcttcaggctccggatatcggacagctgtttcacgccgcgctgagctccatggcggcc
aagctgcgggacgagggacgaagctggggggccatgacgccggacgaatgccggatggaa
gccggcaagacggtggacatgctgtctccgatgcttcagggagagattctgcttagctcg
aagcgctacggctatatttcccgcaagctaaagaatattgtcgggcgtgcctccgtaatt
ctcggagagcacgcccggcggggcagcttcgacatcgcttttctggagctggatttcgga
cccggcaagccgctgccgcccctgcgcatcgagctcccgaacgggtgcctgatggaagtc
gtcggaaggatcgaccgggttgacaccgcagagggcgagaacggaatactgctgcgggtc
attgattataagtcaagccgcaaggatctaaagctgcatgaagtttactacgggctgtcg
ctgcagatgctgacctatctcgatgtgctgctaacctatgccgaggagtggctgggggag
cctgcgtttccggcgggaacgctgtatttccacgtccatgatccgctgctttcttcagcg
aacggcatgaacctggagcaggcgcagcaggagctgcttaagcggttcaagatgaagggt
ctccttatggcggaccgcgaggtcgtctcacttatggatacgagtctggacaaggggcat
tccagtatcgtgcctgttgcgattaagagcgatggcagcttctacagcagcgcatccgtc
gccacacccgagcagtgggggcgccttctgtcttcggtaagagggacgattacggagatc
ggaacccgcattaccgaaggagatgtggcaatcacgccttaccggattcagcaggagacc
gcatgcacgttctgttcttacagggcagtgtgccagttcgacgaggccgtagagggcaac
ggattcaaacacttgggcaagccgggcaaagaggccatctgggagatgctgtcccgccaa
gacgaaggaggaaacagaccgtga
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