Paenibacillus sabinae: PSAB_17950
Help
Entry
PSAB_17950 CDS
T03064
Name
(GenBank) Heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
psab
Paenibacillus sabinae
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PSAB_17950
Enzymes [BR:
psab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
PSAB_17950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
RdgC
Motif
Other DBs
NCBI-ProteinID:
AHV98484
UniProt:
X5A3S3
LinkDB
All DBs
Position
complement(3887594..3889678)
Genome browser
AA seq
694 aa
AA seq
DB search
MMTIKEKAVTFSWARHAVDKLKTELDFFRSEEILLPEEPGGWWHQYVCPRHHTELIFDAA
ERDAVVFSCPKGCKLEGEPYRGAWLVYRHQAMARYALQAAAVYAADGEDFYSGLARTILA
GYAEQFPLYPVHPDAQPWMLRGRAFHQALTEAIWSTTLIRAYLLLVDHGVTFTAGEEKKL
QAFFTMLEESMEQYRRILIHEKKNAENNYTAWLNASLACVYAAKGTGEKLGSLLEGEGGF
YHHLSIGVKPDGFEFEGSTYYHIFVLRAYLIAAEMAERFGVDLYDAKGDQGQSIRGMFQL
LVKLSGDNGELPALHDGPYARVPFAREIAEVFEIGCAVYKDPTFHPVLAKAYRYLYGQEE
RTGLEAVLYGQEESMELHSASWKRASVLLPDSGFAILRHPGNPLSVLADFGEHGGSHGHY
DKLHITIMHRLGEVAPELGMVPYGSTLRKEWYAETASHNTVSIGGRSQAPHTGSCRQFRQ
ENEDTYLWIRSDGAYEEAVLDRHLLLTDGWLLDWFHVEQVTGREQDREIDWWYHPTGHLL
FPVESSRVRTDSPAVLGQEAGYGSVEVLSLLKNETDCALRAGWSTRHGEGGHDPEYEVTV
SALLPPGSILHEIRTPGITEDPSRRIRGIMLRHRGPSAHFITVYRAGHEPAVLKLVSQAG
GPARIQIEADGQRVAYCLNPEAGLIQEEYRNTEE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccataaaggagaaagcggttactttttcctgggcccgccatgcggtggataaa
ttgaagacagagctggactttttccggagtgaagagattcttcttccggaagagcccggc
ggctggtggcatcaatatgtgtgtccccggcatcataccgagctgatcttcgatgctgca
gagcgggatgcggttgtcttttcttgtccgaagggctgcaagctggaaggtgaaccgtac
cggggagcatggctggtataccggcatcaggcgatggctcggtacgcgctgcaggctgct
gcggtatacgccgcagacggggaagacttctatagcggcctggcccggacgattcttgcc
ggatatgcggagcagttcccgctatatccggttcatcccgatgctcaaccctggatgctt
aggggccgagcctttcatcaggcgctgacggaggctatctggtccaccacgcttattcgg
gcctacttgcttcttgtggaccatggagtgacgttcacggcaggggaagagaagaagctg
caggcgttcttcacgatgctggaggagagcatggagcagtaccgccgcattctcattcac
gagaagaagaatgcagagaacaattataccgcatggctaaacgccagcctggcttgcgta
tatgccgccaagggtaccggggaaaagctcggttccctgctggagggggaaggcgggttc
tatcatcatctgtctattggcgtcaagccggacggctttgaatttgaaggcagcacgtac
taccatatttttgtgctgcgggcttatctcatagcggccgagatggccgaacgcttcggt
gtcgacctctatgacgccaagggagatcagggacaatccatccgtggcatgtttcagctg
ctggtaaagcttagtggcgataacggggagcttccagccctgcatgatggtccttatgca
cgcgttcccttcgcgcgggaaatcgctgaagtattcgaaatagggtgtgcggtttacaaa
gaccccaccttccatcctgtactggcgaaggcttatcggtatttatacgggcaggaagag
cggaccggtctggaggcggtgctgtacggacaagaagagagtatggagcttcactccgcc
tcctggaagagggcctctgtcctgctgccggattccggcttcgccatcctccgccacccg
ggcaaccccctgtctgttctggcagacttcggagagcatggcggctctcacgggcattat
gacaagctgcatatcacaattatgcatcggttgggagaggttgctcccgagctgggaatg
gttccttacggctccactttgcgaaaggaatggtatgccgaaaccgcgagccataacacg
gtaagcatcggaggacgctcccaggctccccataccggcagctgcaggcaattccggcag
gaaaatgaagatacgtacttatggattcgctcggacggcgcatatgaagaggctgttctc
gaccggcatcttttattgaccgacggttggctgctggactggtttcatgttgagcaggtg
acgggccgcgagcaggatcgggaaatagactggtggtatcatccgacgggacatttgctg
ttcccggtcgagtcttcccgcgtccggacggactctccggcagtcctcggacaggaagcg
ggctacggttcagtagaggtgctatccttactgaagaatgagacggactgtgcgttaaga
gcagggtggagcacccgtcatggtgaagggggtcacgacccggaatatgaagtgaccgta
agcgctctgctgccgcccggctccattctgcatgaaatccgcacaccgggtattaccgaa
gacccgagcaggcgcattcgaggcatcatgcttcggcacagaggcccctcggcccatttt
attacggtttaccgggccggtcatgaaccggctgtactgaagcttgtgagtcaagcgggc
ggaccggcccgaatccagatagaagcagatgggcaacgagttgcctattgcctgaacccc
gaagcgggactgattcaggaagagtaccggaatacggaggagtaa
DBGET
integrated database retrieval system
