Paenibacillus sabinae: PSAB_18205
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Entry
PSAB_18205 CDS
T03064
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSAB_18205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_18205
Enzymes [BR:
psab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSAB_18205
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSAB_18205
RecFOR pathway proteins
PSAB_18205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
AAA_22
AAA_14
nSTAND3
AAA_18
NTPase_1
AAA_3
NB-ARC
RNA_helicase
Sigma54_activat
TsaE
Resolvase
Rad17
AAA_24
AAA_2
Sigma54_activ_2
Bac_DnaA
DUF815
AAA_28
AAA_17
ABC_tran
AAA_25
NPHP3_N
NACHT
AAA_33
bpMoxR
IstB_IS21
AAA_19
ATPase_2
RsgA_GTPase
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AHV98535
UniProt:
X4ZPS6
LinkDB
All DBs
Position
complement(3953857..3954864)
Genome browser
AA seq
335 aa
AA seq
DB search
MEDRIISANLMMEDQAVELSLRPRYLAEYIGQNQVKENLKIYIEAAKMRSEALDHVLLYG
PPGLGKTTLANIIANELGVNLRTTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLHRTV
EEVLYPAMEDFALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVVSRLE
FYTVDELSYIVSRGADILGIEILGDAAEEIALRSRGTPRIANRLLKRVRDFAQVKGDGII
TPDIAGESLKRLQVDPRGLDNIDHKMLHSMITGFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFLQRTPRGRVVTPAAYQHLGLPLPPEQS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccggatcatatccgcaaatttaatgatggaagaccaggcggtggagctcagt
ctgcgtccccgctatttggctgaatatattggacagaaccaggttaaggagaacctgaag
atttatatcgaagcggcaaaaatgcggagtgaggcgctggatcatgtgctgctgtacggg
cccccggggctgggaaagacgacactcgccaacattatcgccaacgagctgggagtgaat
ctccggacgacgtccggtcccgcgattgagcgtccgggggatttggcggcgctgctgacc
aatctgcaggagggcgatgtgctgttcatcgacgagattcaccggctgcatcggacggtg
gaggaagtgctgtatccggcgatggaggattttgccctcgacattatgatcggcaagggg
ccaagtgctcgctcggtccggctggatctgccgccgttcactctgataggggctaccact
cgagcaggcctgttgtccgcaccgctgcgcgaccgcttcggcgttgtcagccggctggag
ttctacacggtcgatgagctgagctatattgtctcacggggcgccgacattctcggcatt
gaaatcctcggcgacgctgccgaggagattgcgctgcgctcgcggggaactccccggatc
gccaaccggctgctgaagcgggtccgtgattttgcccaggtcaaaggtgacgggattatt
acaccggacatcgccggagaatcgctgaaaaggcttcaggtcgatccccgaggccttgat
aatatcgatcataagatgctgcactccatgatcacgggctttcgcggcgggcctgtcggg
ctggatacgattgccgcgacgataggcgaggagagccagacgatagaggatgtctatgag
ccgtacttgctgcaaatcggcttcctgcagcgtacaccccggggaagagtggttaccccg
gccgcttaccagcatttaggacttccgctccctccggagcagtcttga
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