KEGG   Paenibacillus sabinae: PSAB_20810
Entry
PSAB_20810        CDS       T03064                                 
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
  KO
K03090  RNA polymerase sigma-B factor
Organism
psab  Paenibacillus sabinae
Brite
KEGG Orthology (KO) [BR:psab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psab03021]
    PSAB_20810
Transcription machinery [BR:psab03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSAB_20810
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 Sigma70_ECF GerE HTH_50 HTH_38 TnsD HTH_Tnp_ISL3 HTH_28 KORA HTH_29 HTH_24 HTH_10 MarR DUF1492 MarR_2 HTH_31 HTH_3 Phage_antitermQ CENP-B_N
Other DBs
NCBI-ProteinID: AHV99053
UniProt: X5A421
LinkDB
Position
complement(4527277..4528047)
AA seq 256 aa
MNDKVTPPESMDESVSLIWEYQQTKDNDIATALIHKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVKLERSPDVGEIANYLDLSVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDANDYDTVERRMDLQQALGQLKEQEQKVLLLAFQEGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNSSY
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaatgataaagtgactcccccagagtccatggacgaatccgtttctctcatttgggaa
tatcagcagaccaaggataatgatattgccaccgcattaatccataaatatgaacctatg
gtcaaaatggctgcaggcaagatcgcccgcaaccgccccgacttgtatgaagacctgtat
caggttggccagatggctctcatccgtcttctgcagcagtacgatatcagtttaggtatt
cctttcgagccgtatgccatgaagagcatgatcgggcatatgaagaattttctccgcgat
aaatcctggtacatacaggttccgagacgcatcaaggaaaaaggtgcattggttcagcag
gcgattgatgaactgaccgtcaagctggagcgttctccggacgtgggcgaaatcgccaac
tacctggatctgtcggtggaggaaacggtcgaagtgctcgcaggcagggaatgctaccat
tacgtttctctcgattctccgctgtctcaagaggagactggcgctacgctgggcgaattg
atcagctcggatgcgaacgactacgacaccgtagagcgccgcatggaccttcagcaggcg
cttggacagctgaaggagcaagagcagaaggtgctgctgctggccttccaggaaggacag
tcccagcgggcaatcgctcagaagctgggtgtatcgcagatgagcgtttcgcgtattcag
aagcgcgcgactgagaagctgaagcagattatgtccaattcttcttactga

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