Paenibacillus sabinae: PSAB_22000
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Entry
PSAB_22000 CDS
T03064
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
psab
Paenibacillus sabinae
Pathway
psab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSAB_22000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_22000
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSAB_22000
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSAB_22000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
AAA_22
DUF1995
Arg_decarbox_C
AAA_5
AAA_7
AAA_19
TrwB_AAD_bind
DnaB_C
AAA_25
HEM4
PVL_ORF50
fvmX5
Motif
Other DBs
NCBI-ProteinID:
AHV99289
UniProt:
X5A679
LinkDB
All DBs
Position
complement(4782099..4784090)
Genome browser
AA seq
663 aa
AA seq
DB search
MNDIVVSTKTFQLESEYTPQGDQPRAIGELVEGLSAGMKHQTLLGATGTGKTFTIAQMIA
KVNRPTLVIAHNKTLAAQLASEFKEFFPQNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPQEYGSLLLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASQGEHAIRVELFGDEIERITEIDVLTGEL
IGEREHVAIFPASHFVTQEETMRLALVNIERELEERLAVLRDAGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFRERGATPYTLLDYFPDDMLIVIDESHVTLPQIRAMYNGD
QARKTVLVEHGFRLPSALDNRPLRFEEFEEKVKQIVYVSATPGPYELEKCDTMVEQIIRP
TGLLDPIIEVRPTEGQIDDLIGEIRERLDRDERVLITTLTKKMSEDLTDYLKEIGIKVRY
LHSDIKTLERIAILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSEGKVLMYGDHITESMDKAITETQRRRSIQIAYNEQHGITPQTIRKRVRD
VIEATKVAESKADYLTGAGGKMSKKERQSLMQRLEAEMKEAAKNLQFERAAELRDALLEL
RAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatattgtcgtcagtacgaagactttccagttggagtccgagtacacaccccag
ggcgatcagccccgcgccatcggagaattggtggaaggcctaagcgcgggcatgaagcac
cagaccctgctgggagcgacgggtacgggcaagacgtttaccattgcgcagatgatcgcc
aaggtgaaccggcctacgctggtcattgcgcataacaagacgctagcggctcagctggcg
agtgaattcaaggagttttttccgcagaactcggtcgattatttcgtgagttattacgac
tactaccagccggaggcctatatcccgtcttcggatacttatattgagaaggattccagc
atcaatgaggagatcgacaagctccgccactccgctacgagttcgctgttcgaacgaagg
gatgtcattatcgttgcgagcgtgtcctgcatttacggcctcggttcgccgcaggagtac
ggcagtctgctgctgtcgcttcgggtggggatggagaagccgcggaatcagatcttaagc
cggctggtggatatccagtatcagcggaacgacatcaatttcgtgcgcggcacgtttcgg
gtgcgcggcgacgtggtcgagatttttcccgcttcgcaaggggagcatgcgattcgcgtc
gagctgttcggcgacgaaatcgagcggattaccgagatcgatgtgcttaccggggagctg
atcggggagcgggagcatgtcgccatttttccggcttcccactttgttacgcaggaagag
acgatgcgccttgctctggtcaacatcgagagggagctggaagaacgtctggccgtactg
cgtgacgccggcaagctgctggaagcgcagcggctggagcagcggacccgctacgacatt
gagatgatgaaggaggtcggtttctgctccggcatcgagaactattccggaccgctgacc
tttcgcgagcgcggggcgactccttatacgctgctggattatttcccggacgacatgctg
atcgtcatcgacgagtcgcatgtgacgcttccgcaaatccgggcgatgtataacggtgac
caggcacgcaagaccgtgctggtagagcacggcttccgtctgccgtccgccctcgacaac
cggccgctgagattcgaggaattcgaggagaaggtcaagcagatcgtctacgtctcggct
acgcccggtccatacgaactggagaaatgcgacacgatggtggagcagattatccggccg
accggcctgctcgaccctatcatcgaggtgcgtccgacggaagggcagatcgacgatctg
atcggtgaaatccgcgagcggcttgaccgcgacgagcgcgtgctgattacgacgctgacg
aagaagatgtcggaagacctcaccgattacctgaaagaaatcgggatcaaggtgcgatat
ctgcattccgacatcaagacactggagcggatcgcgattctgcgcgacctgcggctcggt
acgtttcacgttctcgtgggtattaacttgttaagagaaggactggatcttccggaggtc
tcgctggtcgccatcctcgacgccgacaaggaaggcttcctgcgctccgagcgatcgctg
atccagacgatcggacgcgccgcccgcaactcggaaggcaaggtgctcatgtacggcgac
catatcacggagtccatggacaaagcgattaccgagacccagcggcgccggtccatccag
atcgcctataacgagcagcacggcattacgccgcagacgatccgcaagagagtgcgggac
gttatcgaggcgacgaaggttgccgaatccaaggcggactacctgaccggcgcaggcggc
aagatgagcaagaaagaacgtcagagcttgatgcagcggcttgaagctgaaatgaaggaa
gcagcgaagaacctccagttcgagcgcgccgccgagctgcgcgacgccttgctggagctg
cgggccgagtaa
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integrated database retrieval system
