Paenibacillus sabinae: PSAB_22830
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Entry
PSAB_22830 CDS
T03064
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psab
Paenibacillus sabinae
Pathway
psab03022
Basal transcription factors
psab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PSAB_22830
09124 Replication and repair
03420 Nucleotide excision repair
PSAB_22830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psab03021
]
PSAB_22830
03036 Chromosome and associated proteins [BR:
psab03036
]
PSAB_22830
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_22830
Enzymes [BR:
psab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PSAB_22830
Transcription machinery [BR:
psab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PSAB_22830
Chromosome and associated proteins [BR:
psab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PSAB_22830
DNA repair and recombination proteins [BR:
psab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PSAB_22830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AHV99453
UniProt:
X5A595
LinkDB
All DBs
Position
complement(4975297..4977600)
Genome browser
AA seq
767 aa
AA seq
DB search
MASAVTISVRSLVEYVYRSGSLESGFRSAASLAEGTRIHQKIQQQYKEGDRKEVYLSAEI
PCGELIFTVFGRCDGLLLSGDGSLTVEEIKSTGGPELPEEGREVHWAQALIYAHMIILEQ
ELEAITVRLTYVHTATGEQRSFERLVTAGEAAAFAADTAAAYAPYASLLLKHGERRTESI
RRLEFPFPAYRAEQRRFAGAVYTCIAEGVNLFAQAPTGIGKTMSTLFPAVKAMGEGLLRG
LFYLTAKTVTRIAAEEAFAQMNARGLHLHVVTLTAKEKACFREEGLCGAEYCPFAEGYYD
RINGALMDMLEHETLMDRRVLEHYARKHSVCPFELSLDAAYASDAVICDYNYIFDPRIAM
KRLMEEGKKETALLVDEAHNLVDRGREMFSAALRKAPFLALKRSYKARNRALSAAAGGVN
AMFIALRKACGQDGTGTWAEYPEELPGLLETFVQEAERELLRPSQMLLTEEKGEEEGLLD
AYFDAQGMLRACKMYDERYITYAESGRGDVLLKLFNLDPSHLLTQSSKGFRSRIFFSATL
SPLSYYRDMLGAAEEDYSLTVPSPFHKEQWEISVLPVSTRFRDREKSLVPLSKALAAMAA
RKGNYLAFFPSYQYLQDVYEVFAESVPGIRTLVQGSGMSEEERERFLAAFRPDNGETLLG
FAVLGGIFSEGIDLPGDRLNGVMVVGVGLPQLGLERNLLREYFSARGKNGFHYAYVFPGM
CKVLQAGGRLIRSEHDTGGIILADDRFLEPPYAWLLPDEWRDYRVLG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggcttccgccgtaaccatttcagtacgatcgctggtggaatatgtgtaccgcagcggc
agcctcgaatcgggcttccgcagcgctgcctccttggctgaggggacgcgcatacatcag
aaaatccagcagcagtataaagaaggcgaccggaaagaggtctatcttagcgcggagatc
ccctgcggagagctgattttcaccgtcttcgggcgctgcgacggtctgctgctgtcaggc
gacggcagccttaccgttgaggagatcaaatcaaccggggggccggagctgccggaggaa
gggcgcgaggtgcactgggcccaggcgctcatatatgcacatatgatcatcctggagcag
gagcttgaggcgatcacggtcaggctcacttatgtgcacaccgcgaccggggagcagcgg
agcttcgaacggctcgtgaccgccggggaagcggcggcttttgcggcggataccgcggcg
gcttacgctccctatgcgtcacttctccttaagcacggggagcggcggaccgaaagcatc
cgcaggctggagtttccgtttcccgcctatcgtgcggaacagcggcgttttgcgggcgcc
gtctacacctgcattgcggaaggcgtgaatctgttcgcccaggcgccgacgggcatcggc
aagacgatgtccacgctttttccggcggtcaaggcgatgggagaagggctgctgcgcggc
ctgttctacctgacggccaagaccgttacacggatcgccgcggaggaagcctttgcccag
atgaacgcccggggcctccatctgcatgtggtcacgctgaccgccaaggagaaggcctgc
ttccgggaggaagggctctgcggtgcggaatactgcccttttgccgaagggtattatgac
cgcatcaacggcgcgctgatggatatgcttgagcacgaaacgctgatggaccggcgggta
ctggagcattacgcccgcaaacattccgtatgcccgttcgagctgtcgctcgacgcggct
tatgccagcgacgccgtgatttgcgactataactatatttttgatccccgcatcgccatg
aagcggctaatggaggaagggaagaaagagacggcgctgctagtcgacgaggctcataat
ctggtcgaccgcggccgggagatgttctccgcggctttacgcaaggccccctttcttgcg
ctgaagcggagctacaaggcacggaaccgcgcgctgagcgcggcggcggggggcgtgaac
gctatgttcatcgctctccgcaaagcatgcgggcaggacggcacaggtacatgggccgag
tatcccgaggagcttcccgggctgctggagacgtttgtgcaggaggcggaacgggaactg
ctccggccttcgcagatgctccttactgaagagaagggggaggaagaagggctgcttgac
gcctattttgacgcccaaggcatgctgcgcgcctgcaagatgtacgacgagcggtacatt
acctacgcggaaagcggaaggggcgatgtcttactgaagctgttcaatctcgacccgtcg
catctgctgacgcagtcctccaaaggcttccgcagccggatttttttctcggcaacgctg
tcgcccctttcgtattaccgggatatgcttggcgcggcagaagaggattacagtctgaca
gtgccttccccattccacaaggagcagtgggaaatcagcgtcctgccggtgtcaacgcgg
tttcgcgaccgcgagaaatcgttagtgcccctttccaaagcgctcgcggcgatggccgcc
cggaaagggaactatttggccttttttccttcctaccagtatttgcaggacgtatacgag
gtttttgccgagtcagtccccgggatcaggacgctggtgcagggaagcgggatgagcgag
gaggagcgggagaggtttctggccgccttccgtccggataacggagagacgctgctcggg
ttcgcagtgcttggcgggattttctcggaagggatcgatttgccgggagaccggctgaat
ggcgtcatggtcgtcggcgttggcctgccccagctcggactggaacggaacctgctaagg
gagtatttcagcgctcggggcaagaacggatttcattacgcttacgtatttcccggcatg
tgcaaggtgcttcaggcgggagggcggctcatccgcagcgaacacgatacgggagggatt
atccttgccgatgaccgtttcctggagcccccttatgcatggctgctgccggacgaatgg
agagactaccgggtgctgggataa
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integrated database retrieval system
