Paenibacillus sabinae: PSAB_23245
Help
Entry
PSAB_23245 CDS
T03064
Name
(GenBank) PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Organism
psab
Paenibacillus sabinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
ABC_sub_bind
PAS_9
Lge1
Motif
Other DBs
NCBI-ProteinID:
AHV99536
UniProt:
X4ZJA4
LinkDB
All DBs
Position
complement(5076282..5079329)
Genome browser
AA seq
1015 aa
AA seq
DB search
MSKFTEKFSQLDAGISKRGEDMGSEMAYITKQGVWRLLLLVLFLMGLCPPLAEGAAEAPQ
QNVLILHSYHKGFSWTDDQNNGIEERLKSSKVPPVIYTEYLDWKRYPNEENLQHFYELIK
GKYAKLHIDAIITTDDRAFDFAAKNRKELLSDAPIIFSGINEVGYDQIKNQKNITGVIEN
IDPSETIKMALYINPSIRNVYLVYDNSESGLSTAQLVIKKLKSMNLDLKLHSMNRMSEEE
IKRTASSLSSDSILLATTFYSDVTGKITELDRFSSELSAISTVPLYYMYEYGLNHGAFGG
NLLSGKLLGEKAANVALSVLGGENPDTIPVSYAGTSRNAFDYNQLEHFHIKVKDLPPGSE
VINKPFSFYETYRSLVLILIAVFSVLIVFIAILLFHAGVVRRIRKQLMESNERFSLAAFG
ADAVIWDLDMTTMIYYFSDRWYELLGYEIGEIDEHYIGWSNIIHPDDLEQEERQRKDHLS
GKTVYYYSEYRIRAKSGEYKWFQARGKVQRNEEGGYVRFAGSMTDITDRKGYESKLQMSY
QELESTYEELTALQDELLEQYNKVVENQTLLQASEEKYRVLAFNDELSGLPNRLSLTEEL
KAFIEKNESGQAALFFMDIDNFKYINDTMGHTFGDLLLKQAGERLLALSAGNSRRYRFGG
DEFVILLKDTEQPEQTVFYAEALIQSFKEPFQLGDSTVHVSISVGIAQYPRDGRTAEALL
KNADIAMYRAKQAGKGTYMLYGQNMQQYFDERVIIEKHLREAIDNNELSLQYQPKVTLPN
GELWGFEALIRWNSPVLGFVSPLSFIGIAEDCRLIIPIGEWVLRKACLFLAGLHRQGLGP
YHISVNISVIQLLMDDFAETVLKILRETGLNPRYLELEITESIIMESFEEISIKLEYLKQ
RGIGIALDDFGTGYSSLSYLKQLPITTLKIDKSFIDGLPGEGSSMPLAGSIVAIGHDMGL
IVTAEGVETKEQLEFLRRVNCDKVQGYYISRPIAEGQVQAWTRQYARQMINVEKC
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaaatttaccgaaaaattttcgcagctggatgcaggcatttcgaagcggggtgag
gatatgggatcagaaatggcatatataacaaagcagggagtctggcggttattactgctc
gttctgttcttgatgggcctctgcccgccattggccgaaggagcggcggaagctccccag
cagaatgtcctgatcctgcattcctaccataaaggattctcttggacggacgaccagaac
aacggcattgaagagcggctcaagagctcgaaggttcctcctgtcatttatacggaatac
ctggactggaaaaggtatccaaacgaggagaatctgcagcacttttacgaattgatcaaa
ggcaaatacgcaaaattacatatcgacgctattataacgacagatgaccgcgcgttcgat
tttgcagccaagaaccgaaaagagctgttaagcgacgcgcccattatttttagcggcata
aatgaggttggctacgatcaaatcaagaaccagaagaacatcactggcgtcatcgagaat
atcgacccttccgaaacgataaaaatggcgctttacattaatccctccatccgaaatgtc
tatcttgtatacgataactcggagagcggcttgtctactgcccaactagtcataaagaaa
ctgaaatcgatgaaccttgacttgaagctccatagcatgaaccggatgtcagaagaagaa
atcaaacggacggcatcgtcgctttcttccgacagcatcctgctggcgacaaccttttac
agcgatgttaccggcaaaattaccgagcttgaccggttttcgagcgaactttcggccatt
agtacagtaccgctttactatatgtatgaatacggactcaatcacggcgcattcggtgga
aacttgctcagcgggaagctcctgggggagaaagctgcgaatgtggcgctgagtgtcctg
ggcggagaaaatccggacaccatccccgtctcttacgccggcacgagccgcaatgcgttt
gactacaaccaattggagcactttcatattaaagtgaaggacctcccgccgggcagcgaa
gtgattaacaagccgttctctttttatgagacctatcggagccttgtgcttatccttatc
gcggtgttctccgtattgattgtattcatcgccattctgctgttccatgccggggtggtc
agaagaatccgcaaacagctgatggagagtaacgagagattttccttggcggcgttcggc
gccgacgcggtcatctgggacctggacatgacgacgatgatctattacttctcggaccgg
tggtacgagcttctgggctatgaaatcggggagattgacgagcattatatcggctggagt
aacattattcatcccgatgacctcgagcaggaggagcggcagcggaaggatcatctgtcc
ggaaagacggtctattattacagcgaataccggatacgcgccaagtccggggagtacaag
tggtttcaggccagaggcaaggtgcagcggaacgaggagggcggttacgtccggttcgcc
ggctcgatgacggatattacggaccgcaaagggtatgagagcaagctgcagatgagctat
caggagctggaatcgacgtacgaggagctgaccgcccttcaggatgaactgctggagcag
tacaacaaggtggtcgagaaccagacgctgcttcaggcgagcgaggaaaaataccgggtg
ctagccttcaatgacgagctcagtggattgccgaaccggctgtcgctgacggaggagctg
aaggcgttcatcgagaagaatgagagcggacaggcggcattgttcttcatggacatcgac
aatttcaaatatattaacgacacgatgggccatacattcggcgatctgctccttaaacag
gccggtgagcggctgctcgcgctgtccgccggcaacagcaggcgctaccgtttcggcgga
gacgaatttgtcattctgctcaaggacacggagcagccggagcagacggttttttacgcg
gaggcactgattcagagcttcaaagagccgtttcagctgggcgacagcaccgtgcatgtc
tccatcagcgtcggaatcgcccaatacccgcgtgacggcaggaccgccgaggcgctgctc
aagaacgccgatattgccatgtaccgggccaagcaggcgggcaaagggacatacatgctg
tatggacagaatatgcagcagtattttgacgagcgggtaatcatcgagaagcatctgcgg
gaggccatcgataacaacgagctgtctttgcaataccagcccaaggtgactcttcccaac
ggagaactgtgggggttcgaggcgctgattcgctggaacagcccggtactgggctttgtc
tcccctttgtctttcattgggattgcggaggattgccgcctgattatcccgataggggaa
tgggtgctgcgcaaggcttgtctttttcttgccggacttcatcgtcaggggctgggaccg
taccatatttcggtcaatatatcggtcatccagctgctgatggacgatttcgcggaaacc
gtgctgaagattttacgcgaaacggggctgaacccccggtacctggagctggagatcacc
gagtccatcattatggagtcttttgaagagatcagcatcaagctggagtatttgaagcag
cggggcatcggcatcgctttggacgatttcgggacagggtattcttccctcagctatctg
aagcagctgccgataacgacgctgaagatcgacaaatcatttatcgacggcctcccgggt
gaaggaagcagcatgccgctggccggctccatcgtcgcaatcggtcacgatatggggctg
atcgttacggcggaaggagtcgagacgaaggaacagctcgaattcctaagacgggtgaac
tgcgacaaggtacagggctactacatcagccgtccgattgcagagggccaggtacaggct
tggacccgccaatatgcccgccaaatgatcaatgtagaaaagtgttga
DBGET
integrated database retrieval system
