Paenibacillus sabinae: PSAB_24120
Help
Entry
PSAB_24120 CDS
T03064
Name
(GenBank) DNA mismatch repair protein MutS domain-containing protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
psab
Paenibacillus sabinae
Pathway
psab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSAB_24120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_24120
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PSAB_24120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
DUF7646
Motif
Other DBs
NCBI-ProteinID:
AHV99709
UniProt:
X5A7D2
LinkDB
All DBs
Position
complement(5247722..5249668)
Genome browser
AA seq
648 aa
AA seq
DB search
MHLPSRETLEYNRIKKEVERYAVSYAGRLLIRELVPMTELTAVQRAVQETAEAKELLMKG
SSVPIPSLEGIEWVMSLLRTGYLFNEQDFTAVSVFLNSCSQLRKYMASKDASLRIGAYAA
SLMELKTVKEEIERCIRFGVIDDGASKGLEKVRKRLRVTKERLLKKIESVMSRHQSILQE
SLYSMRGGRYIIPVKREYHKQVKGSVLDQSTSGQTVYVEPEEVAALQGELEMLTSEEARE
EGIILSMLTGLIEREQEALRLNIEITGVYDFIFAKAKYAAQTGAGAVTFNNRGYMRLLGG
KHPLLEGMVPIDVEFGLDYKSLVITGPNTGGKTVLLKTVGLLTLMAQSGLLIPADKESQL
PVFSEVMSVIGDGQSLTQSLSTFSAQMKGVDEMLRAAGRNVLLLIDELAAGTDPGEGIAL
SIAILEELSRRGANVIVTTHFNEIKVFASAAPDFQNARMEFDPVTLRPLYKLTIGEAGHS
YALQIAEKLGLDAKVIERSRQIAASHPRKPLAEQEMRLWYDREGRKEEKATAGKGSSAAK
KEAKVHPEQPHVFEVGDAVYVTALGRTGIVYEKRDARGMVGVMVQKHKMQFNHKRLKPYL
SKEELYPEDYDLDIVLETKENRKKRHLMGRKHVEGLMIIKEKDEEEGS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaccaagccgggaaacgctcgaatacaatcggattaagaaagaagtggaacgt
tatgccgtctcctatgccggaaggttgctcattcgggagcttgtcccgatgactgaacta
acggctgtgcagagagcggtgcaagagacggcggaggccaaggaattattaatgaaagga
tcgagtgtgccgataccttcattagaagggattgaatgggtgatgtcgctgctcaggacg
ggttatctgttcaatgagcaggattttaccgcggtgagcgtattcctgaacagctgctcc
cagctgcgcaagtatatggcttccaaagatgcttccctaagaataggagcgtatgccgcc
tcgctgatggagctgaagacggtgaaagaggagatcgagcgctgcatccggttcggcgtc
attgacgacggggcaagcaagggactagagaaggtgcgcaaacgtctgagagtaacgaag
gagcggctgctgaagaaaatcgagagtgtcatgtcgcggcatcagtccattttgcaggag
agtctgtacagcatgcggggaggccgttatataattccggtcaagcgcgagtaccataaa
caggtcaagggttcagtgctcgatcagtccaccagcgggcagacggtgtatgtggagccg
gaggaggtcgccgcgttgcagggagaactggagatgctgacaagcgaggaggcccgggaa
gaggggatcatcttaagcatgctgaccggactgatcgaaagggagcaggaagccctgcgg
ctgaatattgaaattacgggcgtgtacgattttatttttgccaaggccaaatatgccgcc
cagacaggagcgggggcggtaacgttcaacaaccggggatatatgcggcttctcggaggc
aagcacccgctgcttgaaggcatggttccgattgatgtggaattcggtctggactataag
tcgcttgtgattaccggtccgaatacaggcggaaagacggttctgctgaagacggtaggc
ctgctcacgctgatggcccaatcgggtctgctgattccggcggataaagagagtcagctt
ccggtattttctgaggtaatgagcgtgatcggggacgggcaaagtctgacacagtcgctc
agcactttttccgctcaaatgaagggtgtggatgaaatgctgcgggctgcaggccgcaat
gtgctgctgttgatcgacgagctggctgcgggcacggacccgggcgaaggaattgctctg
tcgatcgccattttggaggagctcagccgcagaggagcaaatgttatcgtcacgacgcat
tttaatgaaataaaagtatttgcctcggcagcgccggattttcaaaatgcccgaatggag
tttgatccggtgacgctgcgtccgctctataagctgacaataggagaagcgggacacagc
tatgcgctgcagatcgccgagaagctcggtctggatgcaaaggtcatcgaacgctcgcgg
caaattgccgccagccaccctcggaaaccgcttgccgaacaagagatgcgcctgtggtat
gatagggaaggaagaaaggaagagaaggctacagcaggaaaaggcagcagcgctgcgaaa
aaagaagcgaaggttcatccggaacagccgcatgtgtttgaagtcggggacgcggtctat
gtcacagcgctgggcaggacgggaatcgtctacgagaaacgggatgccagaggcatggtg
ggcgtcatggtgcagaagcataaaatgcagtttaaccataaacgcctgaagccgtattta
tccaaagaggagctgtacccggaagattatgatctggatattgtgcttgaaacgaaggag
aaccggaagaagcgccacctgatggggcgaaagcatgtggaaggcttgatgattatcaag
gaaaaggatgaggaggaagggtcgtaa
DBGET
integrated database retrieval system
