Proteiniphilum saccharofermentans: PSM36_0042
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Entry
PSM36_0042 CDS
T04672
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac03030
DNA replication
psac03410
Base excision repair
psac03420
Nucleotide excision repair
psac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSM36_0042 (polA)
03410 Base excision repair
PSM36_0042 (polA)
03420 Nucleotide excision repair
PSM36_0042 (polA)
03440 Homologous recombination
PSM36_0042 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psac03032
]
PSM36_0042 (polA)
03400 DNA repair and recombination proteins [BR:
psac03400
]
PSM36_0042 (polA)
Enzymes [BR:
psac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSM36_0042 (polA)
DNA replication proteins [BR:
psac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSM36_0042 (polA)
DNA repair and recombination proteins [BR:
psac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSM36_0042 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSM36_0042 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
SCD18878
UniProt:
A0A1R3T0X2
LinkDB
All DBs
Position
I:complement(64032..66830)
Genome browser
AA seq
932 aa
AA seq
DB search
MHKNKLFLLDAYALIYRSYYAFIRNPRVNSKGENTSAIFGFVNTLEEVLHKENPSHIAVA
FDPDGPTFRHQEFEAYKAQREATPEDIRRSVPIIKQVIAAYNIPILEVPGYEADDVIGTI
AKRVDKDRFDVYMMTPDKDYGQLAESHIFIYKPKYGSNDFDILDDKKVMEKYDLSSPTQM
VDLLGLMGDTSDNIPGCPGVGEKTAIKLLKEFGTIENLLAQSHQLKGALQKKVEDNREQI
LFSKFLATIKTDVPIEVKEDDFARKEINRETMKALFETLEFRTFLNRMFNQTPAVVVSKG
PVQGNLFDTVEVEEETEIETLPPVELSAGYTDIHTTPHQYTMIRSEEEMAGLCKKLTAQP
SVCFDTETTGMDPLLSDLVGLSFAFKEGEAWYVPISADREEACRQAAIFKPFFENEAIDK
IGQNLKYDILSLRNYDIHVKGKLFDTMIAHYLLNPEIRHGMDYMAETYLKYRTIHIEELI
GPRGKNQKSMRDVDPKIVVDYAAEDADITLKLKNILEREIHDNKLEKLFYDIECPLIYVL
ADMEWTGVRLDLKALEELSTQYTAELQRIEKDITDMAGIEFNVNSPKQIGEILFDRLMIV
DKPKKTKTGQYKTSEEELEKIRSKHPIIEKILEQRGLKKLLGTYIDAFPLLINPRTGKIH
TSFNQTVAATGRLSSTNPNLQNIPIRDERGKEMRKVFIPDEGCLFVSSDYSQIELRIMAH
LSGDKNMTEAFSKGQDIHAATAAKIYKIPLEEVTGDMRRKAKTANFGIIYGITPFGLSER
LTISRTEAKELIDGYFETFPQVKQYMDESISQARERGFVETILGRKRYLADINSRNAIVR
GYAERNAINAPIQGSAADIIKMAMIRIFTRLQKEKLQSKMILQVHDELNFNVFPEELEKV
KAIVTEEMENACQLSIPLKTDIGVGENWLAAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaacaagcttttccttctggacgcctatgctcttatttatcgttcctattat
gctttcatcaggaacccgagggtaaactcaaaaggtgagaatacatctgccattttcggg
tttgtaaataccctggaagaagtactccataaggaaaatccatcacatatcgcggtggct
ttcgatcctgatggccctactttccgtcatcaggaattcgaggcctataaggcgcaacgt
gaagctacccctgaagatatcaggcgatcggttcccatcatcaagcaggtcattgccgct
tacaatatccccatactggaagtacccggctatgaagcagatgatgtaatcggcactatt
gccaaacgagtagataaggaccgttttgatgtttatatgatgacaccggacaaagactac
gggcagcttgccgagtcccatatcttcatctacaaacccaaatacggcagcaatgatttc
gatatcctggacgataaaaaggtaatggaaaagtatgacctctcgagtccaacccagatg
gtcgacctgctggggctgatgggagatacctcagataatatccccgggtgcccgggagta
ggagaaaagacggctataaaactgctcaaagagttcggcacaatcgaaaacctacttgca
caaagccatcaactgaaaggtgcgttgcaaaagaaggtagaggataaccgggaacagatc
cttttctcaaaattccttgccactatcaagacggatgtacccattgaggtaaaagaggat
gattttgcccggaaagagataaacagagagaccatgaaggcacttttcgaaacgctggaa
ttccgtacattcctgaatcgcatgttcaaccagacgcctgcggtcgttgtatccaaaggg
cctgtacagggcaatctgtttgatacggtcgaagtcgaagaggaaaccgaaatagaaaca
ctgccgccggtcgaattatccgccggttacaccgatatccacacaacaccccatcaatac
acgatgatacggtcggaagaggaaatggcaggactatgcaaaaagttgacggcacagcca
tcggtctgcttcgacacggaaactaccggtatggatccgttattaagtgacctggtggga
ctctccttcgcgttcaaggagggggaagcctggtatgtacctatttctgccgaccgtgaa
gaggcctgtcgccaggcagcgatattcaagcctttctttgaaaatgaggctatcgataag
atcgggcaaaacctcaaatatgatatcctgtcactccgcaattatgatatccatgtgaaa
gggaaactcttcgacaccatgatcgcccactatctcctgaacccggaaatccggcacggg
atggattatatggctgaaacctacctgaaataccggacgatccatatcgaagaactgatc
ggcccaagaggtaagaaccaaaaaagcatgcgcgatgtggatccgaagatcgtggtcgat
tatgccgcagaagatgccgacatcacactgaaactgaaaaatatactggaacgggagatt
cacgataacaaactggagaagctgttctacgacattgaatgtcctcttatctatgtgctg
gccgatatggaatggaccggggtaaggctcgacctgaaagcattggaagagctttctacc
caatacaccgccgaactgcaacggattgaaaaagatatcaccgatatggccggtatcgag
ttcaatgtcaattctcccaaacaaatcggtgagatactgtttgacaggctgatgatcgtg
gataagccgaaaaagaccaagaccggacaatataaaaccagtgaggaagagctggagaaa
atccgctcgaaacatccgatcatcgaaaagatactggagcagaggggacttaaaaaactg
ctcggtacttatatcgatgcattcccgctgcttatcaatccccgtacgggtaagatacac
acctcattcaaccagacggtagccgccacaggacgcctgagcagcaccaaccccaatctg
cagaatatccctatccgtgatgaacggggtaaagagatgcggaaagtatttattcccgac
gaaggatgcctgtttgtttcatcggactactcacagatcgaactgcgtattatggctcac
ctgagcggtgacaagaacatgaccgaagcgttcagtaaagggcaggatatccatgccgct
actgctgccaagatctataagattcccctcgaagaggtcaccggggatatgcggcgtaag
gcaaagacagccaacttcgggattatctacggtatcacacccttcggcctgtcagaacgg
cttaccatctcccgtaccgaagccaaagaactgatcgatggatattttgagactttcccg
caggtgaaacaatatatggatgaaagcatttcccaggcgcgtgagagaggatttgtagaa
acgattttaggacgtaaacggtatctcgccgatatcaactcccggaatgccatcgtacgt
ggctatgctgaacggaatgccatcaacgcccctatccaggggagtgcggcagatatcatc
aaaatggccatgatccgcatcttcaccaggctacaaaaggagaagctccaatccaaaatg
atccttcaggtacatgacgaattgaatttcaatgtattcccggaggaattggaaaaagta
aaagcaattgtgacggaggagatggaaaatgcctgtcaattgtcaatcccgctgaagacc
gacataggggtgggggaaaactggctggcagcacactaa
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