KEGG   Proteiniphilum saccharofermentans: PSM36_0042
Entry
PSM36_0042        CDS       T04672                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psac  Proteiniphilum saccharofermentans
Pathway
psac03030  DNA replication
psac03410  Base excision repair
psac03420  Nucleotide excision repair
psac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSM36_0042 (polA)
   03410 Base excision repair
    PSM36_0042 (polA)
   03420 Nucleotide excision repair
    PSM36_0042 (polA)
   03440 Homologous recombination
    PSM36_0042 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psac03032]
    PSM36_0042 (polA)
   03400 DNA repair and recombination proteins [BR:psac03400]
    PSM36_0042 (polA)
Enzymes [BR:psac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSM36_0042 (polA)
DNA replication proteins [BR:psac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PSM36_0042 (polA)
DNA repair and recombination proteins [BR:psac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PSM36_0042 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSM36_0042 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 HHH_5 HHH
Other DBs
NCBI-ProteinID: SCD18878
UniProt: A0A1R3T0X2
LinkDB
Position
I:complement(64032..66830)
AA seq 932 aa
MHKNKLFLLDAYALIYRSYYAFIRNPRVNSKGENTSAIFGFVNTLEEVLHKENPSHIAVA
FDPDGPTFRHQEFEAYKAQREATPEDIRRSVPIIKQVIAAYNIPILEVPGYEADDVIGTI
AKRVDKDRFDVYMMTPDKDYGQLAESHIFIYKPKYGSNDFDILDDKKVMEKYDLSSPTQM
VDLLGLMGDTSDNIPGCPGVGEKTAIKLLKEFGTIENLLAQSHQLKGALQKKVEDNREQI
LFSKFLATIKTDVPIEVKEDDFARKEINRETMKALFETLEFRTFLNRMFNQTPAVVVSKG
PVQGNLFDTVEVEEETEIETLPPVELSAGYTDIHTTPHQYTMIRSEEEMAGLCKKLTAQP
SVCFDTETTGMDPLLSDLVGLSFAFKEGEAWYVPISADREEACRQAAIFKPFFENEAIDK
IGQNLKYDILSLRNYDIHVKGKLFDTMIAHYLLNPEIRHGMDYMAETYLKYRTIHIEELI
GPRGKNQKSMRDVDPKIVVDYAAEDADITLKLKNILEREIHDNKLEKLFYDIECPLIYVL
ADMEWTGVRLDLKALEELSTQYTAELQRIEKDITDMAGIEFNVNSPKQIGEILFDRLMIV
DKPKKTKTGQYKTSEEELEKIRSKHPIIEKILEQRGLKKLLGTYIDAFPLLINPRTGKIH
TSFNQTVAATGRLSSTNPNLQNIPIRDERGKEMRKVFIPDEGCLFVSSDYSQIELRIMAH
LSGDKNMTEAFSKGQDIHAATAAKIYKIPLEEVTGDMRRKAKTANFGIIYGITPFGLSER
LTISRTEAKELIDGYFETFPQVKQYMDESISQARERGFVETILGRKRYLADINSRNAIVR
GYAERNAINAPIQGSAADIIKMAMIRIFTRLQKEKLQSKMILQVHDELNFNVFPEELEKV
KAIVTEEMENACQLSIPLKTDIGVGENWLAAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgcacaaaaacaagcttttccttctggacgcctatgctcttatttatcgttcctattat
gctttcatcaggaacccgagggtaaactcaaaaggtgagaatacatctgccattttcggg
tttgtaaataccctggaagaagtactccataaggaaaatccatcacatatcgcggtggct
ttcgatcctgatggccctactttccgtcatcaggaattcgaggcctataaggcgcaacgt
gaagctacccctgaagatatcaggcgatcggttcccatcatcaagcaggtcattgccgct
tacaatatccccatactggaagtacccggctatgaagcagatgatgtaatcggcactatt
gccaaacgagtagataaggaccgttttgatgtttatatgatgacaccggacaaagactac
gggcagcttgccgagtcccatatcttcatctacaaacccaaatacggcagcaatgatttc
gatatcctggacgataaaaaggtaatggaaaagtatgacctctcgagtccaacccagatg
gtcgacctgctggggctgatgggagatacctcagataatatccccgggtgcccgggagta
ggagaaaagacggctataaaactgctcaaagagttcggcacaatcgaaaacctacttgca
caaagccatcaactgaaaggtgcgttgcaaaagaaggtagaggataaccgggaacagatc
cttttctcaaaattccttgccactatcaagacggatgtacccattgaggtaaaagaggat
gattttgcccggaaagagataaacagagagaccatgaaggcacttttcgaaacgctggaa
ttccgtacattcctgaatcgcatgttcaaccagacgcctgcggtcgttgtatccaaaggg
cctgtacagggcaatctgtttgatacggtcgaagtcgaagaggaaaccgaaatagaaaca
ctgccgccggtcgaattatccgccggttacaccgatatccacacaacaccccatcaatac
acgatgatacggtcggaagaggaaatggcaggactatgcaaaaagttgacggcacagcca
tcggtctgcttcgacacggaaactaccggtatggatccgttattaagtgacctggtggga
ctctccttcgcgttcaaggagggggaagcctggtatgtacctatttctgccgaccgtgaa
gaggcctgtcgccaggcagcgatattcaagcctttctttgaaaatgaggctatcgataag
atcgggcaaaacctcaaatatgatatcctgtcactccgcaattatgatatccatgtgaaa
gggaaactcttcgacaccatgatcgcccactatctcctgaacccggaaatccggcacggg
atggattatatggctgaaacctacctgaaataccggacgatccatatcgaagaactgatc
ggcccaagaggtaagaaccaaaaaagcatgcgcgatgtggatccgaagatcgtggtcgat
tatgccgcagaagatgccgacatcacactgaaactgaaaaatatactggaacgggagatt
cacgataacaaactggagaagctgttctacgacattgaatgtcctcttatctatgtgctg
gccgatatggaatggaccggggtaaggctcgacctgaaagcattggaagagctttctacc
caatacaccgccgaactgcaacggattgaaaaagatatcaccgatatggccggtatcgag
ttcaatgtcaattctcccaaacaaatcggtgagatactgtttgacaggctgatgatcgtg
gataagccgaaaaagaccaagaccggacaatataaaaccagtgaggaagagctggagaaa
atccgctcgaaacatccgatcatcgaaaagatactggagcagaggggacttaaaaaactg
ctcggtacttatatcgatgcattcccgctgcttatcaatccccgtacgggtaagatacac
acctcattcaaccagacggtagccgccacaggacgcctgagcagcaccaaccccaatctg
cagaatatccctatccgtgatgaacggggtaaagagatgcggaaagtatttattcccgac
gaaggatgcctgtttgtttcatcggactactcacagatcgaactgcgtattatggctcac
ctgagcggtgacaagaacatgaccgaagcgttcagtaaagggcaggatatccatgccgct
actgctgccaagatctataagattcccctcgaagaggtcaccggggatatgcggcgtaag
gcaaagacagccaacttcgggattatctacggtatcacacccttcggcctgtcagaacgg
cttaccatctcccgtaccgaagccaaagaactgatcgatggatattttgagactttcccg
caggtgaaacaatatatggatgaaagcatttcccaggcgcgtgagagaggatttgtagaa
acgattttaggacgtaaacggtatctcgccgatatcaactcccggaatgccatcgtacgt
ggctatgctgaacggaatgccatcaacgcccctatccaggggagtgcggcagatatcatc
aaaatggccatgatccgcatcttcaccaggctacaaaaggagaagctccaatccaaaatg
atccttcaggtacatgacgaattgaatttcaatgtattcccggaggaattggaaaaagta
aaagcaattgtgacggaggagatggaaaatgcctgtcaattgtcaatcccgctgaagacc
gacataggggtgggggaaaactggctggcagcacactaa

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