Proteiniphilum saccharofermentans: PSM36_0639
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Entry
PSM36_0639 CDS
T04672
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSM36_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psac03021
]
PSM36_0639
Transcription machinery [BR:
psac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSM36_0639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_11
PF0610-like_N
HTH_38
HTH_40
PhyR_sigma2
UPF0122
HTH_36
DUF8040
HTH_23
HTH_17
HTH_28
Mycobacteriophage_Gp53
Motif
Other DBs
NCBI-ProteinID:
SCD19469
UniProt:
A0A1R3T005
LinkDB
All DBs
Position
I:complement(827517..828053)
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AA seq
178 aa
AA seq
DB search
MNTESYRREFEEIFIQYFPKVRTFAAILLKSEQEAEDIAQDIFVKLWEQPDLWEGNLVRN
YLYTMVKNHVFNRIKRKNIESKYINSRMNRHSLEEITEFKDPLNEIYVQELQLLLRLSLE
QLPDKRRQIFEMSRFENLSNNEIAERLNLSVRTVEQHIYLVLKDLKKLFLIAIFFIKF
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgaatcatacaggagggagtttgaagaaatattcattcagtattttccgaaa
gtcagaacgtttgccgccattcttcttaaatcggaacaggaagctgaggacatagcacag
gatatctttgtaaaattatgggaacaacctgatttatgggaaggaaatcttgtgagaaac
tatctgtatacgatggttaagaaccatgtttttaatcgcattaaacggaaaaatatagaa
tcgaaatatataaactcccggatgaaccggcattctttggaggagataaccgaatttaaa
gaccctcttaatgagatatacgttcaagagttacagctattattgagattatcactggaa
cagttgcccgacaagcgcaggcaaatatttgagatgagtcgctttgaaaatttgagcaat
aacgaaattgcagaaagattgaatttgtcggtgcgaacagtagaacaacacatctatttg
gtcttaaaggatctcaaaaaactttttcttattgcaatttttttcataaaattttaa
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