KEGG   Proteiniphilum saccharofermentans: PSM36_0639
Entry
PSM36_0639        CDS       T04672                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac  Proteiniphilum saccharofermentans
Pathway
psac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSM36_0639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psac03021]
    PSM36_0639
Transcription machinery [BR:psac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSM36_0639
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_24 HTH_11 PF0610-like_N HTH_38 HTH_40 PhyR_sigma2 UPF0122 HTH_36 DUF8040 HTH_23 HTH_17 HTH_28 Mycobacteriophage_Gp53
Other DBs
NCBI-ProteinID: SCD19469
UniProt: A0A1R3T005
LinkDB
Position
I:complement(827517..828053)
AA seq 178 aa
MNTESYRREFEEIFIQYFPKVRTFAAILLKSEQEAEDIAQDIFVKLWEQPDLWEGNLVRN
YLYTMVKNHVFNRIKRKNIESKYINSRMNRHSLEEITEFKDPLNEIYVQELQLLLRLSLE
QLPDKRRQIFEMSRFENLSNNEIAERLNLSVRTVEQHIYLVLKDLKKLFLIAIFFIKF
NT seq 537 nt   +upstreamnt  +downstreamnt
atgaatactgaatcatacaggagggagtttgaagaaatattcattcagtattttccgaaa
gtcagaacgtttgccgccattcttcttaaatcggaacaggaagctgaggacatagcacag
gatatctttgtaaaattatgggaacaacctgatttatgggaaggaaatcttgtgagaaac
tatctgtatacgatggttaagaaccatgtttttaatcgcattaaacggaaaaatatagaa
tcgaaatatataaactcccggatgaaccggcattctttggaggagataaccgaatttaaa
gaccctcttaatgagatatacgttcaagagttacagctattattgagattatcactggaa
cagttgcccgacaagcgcaggcaaatatttgagatgagtcgctttgaaaatttgagcaat
aacgaaattgcagaaagattgaatttgtcggtgcgaacagtagaacaacacatctatttg
gtcttaaaggatctcaaaaaactttttcttattgcaatttttttcataaaattttaa

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