Proteiniphilum saccharofermentans: PSM36_0846
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Entry
PSM36_0846 CDS
T04672
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSM36_0846 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psac03021
]
PSM36_0846 (rpoA)
03400 DNA repair and recombination proteins [BR:
psac03400
]
PSM36_0846 (rpoA)
Enzymes [BR:
psac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSM36_0846 (rpoA)
Transcription machinery [BR:
psac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSM36_0846 (rpoA)
DNA repair and recombination proteins [BR:
psac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSM36_0846 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
SCD19672
UniProt:
A0A1R3T0S2
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All DBs
Position
I:1025115..1026116
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AA seq
333 aa
AA seq
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MAILAFQKPDKVIMLQEDAFSGKFEFRPLEPGYGITIGNALRRILLSSLEGFAITSVKIE
GVDHEFATIPGVIEDVTGIILNLKKVRFKRIVEEFETEKVSIAISGTEVFKAGDIGKLLT
GFEVLNPELEICHMNKKADLRLELTINKGRGYVPADENRDLVASDDVQTLVIDSIYTPIR
NVSFEVEDYRIEQKTDYEKLTIEIKTDGSIQPKEALKEAAKILIQHFVLFSDENKIMLET
SDAESIEEFDEEVLHMRQLLKRKLSDLNLSVRALNCLKAADVETLGQLVSHNKNDLLKFR
NFGKKSLTELEELLSSLKLTFGMDISKYKLDKD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcattccaaaaacccgataaggtaatcatgttacaggaggacgcgttc
tccggtaaatttgaattccgtccgctggaaccgggatacggcatcaccataggcaacgcc
ctgcgccgcatcctgctttcgtcgctggaaggattcgctattacatcggtgaaaattgag
ggcgtggatcatgaatttgcgaccattcccggcgtgatagaagatgtaacaggtattatc
cttaatctgaaaaaagtaaggttcaaaaggatagtggaagagtttgagacggaaaaagta
agcatcgctatttcgggaacggaagtgtttaaagccggagatattggtaaactgctgacc
ggtttcgaagtactgaatcccgaactggagatctgccacatgaacaaaaaagcagatctg
cgtctcgaattgactatcaataaaggacgcggttatgtgcctgccgacgaaaaccgtgac
ctggttgcgtctgacgatgtgcaaacccttgtgatcgactctatttacactccgatccgt
aacgtaagttttgaagtagaagattaccgtatcgaacagaaaacggactacgagaaactc
accattgagattaagaccgatggatccatccaaccgaaagaggcgttgaaagaagcggcc
aagatattgatccagcactttgtattgttttccgatgaaaacaagatcatgctggaaaca
tccgatgccgaaagtatcgaggagtttgatgaagaagtactccatatgcgccagctcctg
aaacgtaaattgtctgacctcaacctgtcggtaagggcattgaattgtctgaaagctgcc
gacgttgaaacgcttgggcaactggtttcacacaacaagaacgacctgcttaagttccgt
aacttcggaaagaaatcgctgaccgagcttgaagaattgctcagcagcctgaagcttacg
ttcggcatggatatatcgaagtacaaattagataaagactaa
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