KEGG   Proteiniphilum saccharofermentans: PSM36_1086
Entry
PSM36_1086        CDS       T04672                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac  Proteiniphilum saccharofermentans
Pathway
psac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSM36_1086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psac03021]
    PSM36_1086
Transcription machinery [BR:psac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSM36_1086
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE PhyR_sigma-like HTH_40 HTH_30 HTH_20 PCI Phage_antitermQ
Other DBs
NCBI-ProteinID: SCD19911
UniProt: A0A1R3SWJ7
LinkDB
Position
I:complement(1374747..1375283)
AA seq 178 aa
MESFSDIQSFNLLFNEYHERFIRFAIGYVKDRQTAEDFVSEAFAVFWENRRLLSPDTRPP
AYLMTIVKNKCLNYLQHQQVQQRVTEDLRDHSEWLLQTKISTLEACEPDFLFSGEIQKII
DSTLNQLPKKTRRIFLMSRVEGFSYSMIARKMDLSQKSIEYHISKALELLRESLKDFM
NT seq 537 nt   +upstreamnt  +downstreamnt
atggagtcattttccgatatacaaagtttcaacctcttattcaacgaatatcacgaacgt
tttatccgttttgcgatagggtacgtgaaagacaggcagacggcagaggattttgtgtct
gaggctttcgcggtattttgggaaaacaggcggctgctatctcccgacaccagaccgccg
gcctatcttatgactatcgttaaaaacaaatgtcttaattatctgcaacatcaacaggta
caacagcgtgtaacggaagacctaagagatcattccgaatggttactccaaacaaagatc
agtacactggaagcatgcgagcccgattttctgttctccggagagatacaaaagatcatc
gactccacattgaatcaattaccgaagaaaacacgacggatattcctgatgagccgtgtt
gaaggattttcatacagtatgattgcccgaaaaatggatctcagtcagaaatctatagaa
tatcacatttcgaaggctcttgagctgctgcgtgaatcgttgaaagattttatgtaa

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