Proteiniphilum saccharofermentans: PSM36_1086
Help
Entry
PSM36_1086 CDS
T04672
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSM36_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psac03021
]
PSM36_1086
Transcription machinery [BR:
psac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSM36_1086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
PhyR_sigma-like
HTH_40
HTH_30
HTH_20
PCI
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
SCD19911
UniProt:
A0A1R3SWJ7
LinkDB
All DBs
Position
I:complement(1374747..1375283)
Genome browser
AA seq
178 aa
AA seq
DB search
MESFSDIQSFNLLFNEYHERFIRFAIGYVKDRQTAEDFVSEAFAVFWENRRLLSPDTRPP
AYLMTIVKNKCLNYLQHQQVQQRVTEDLRDHSEWLLQTKISTLEACEPDFLFSGEIQKII
DSTLNQLPKKTRRIFLMSRVEGFSYSMIARKMDLSQKSIEYHISKALELLRESLKDFM
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggagtcattttccgatatacaaagtttcaacctcttattcaacgaatatcacgaacgt
tttatccgttttgcgatagggtacgtgaaagacaggcagacggcagaggattttgtgtct
gaggctttcgcggtattttgggaaaacaggcggctgctatctcccgacaccagaccgccg
gcctatcttatgactatcgttaaaaacaaatgtcttaattatctgcaacatcaacaggta
caacagcgtgtaacggaagacctaagagatcattccgaatggttactccaaacaaagatc
agtacactggaagcatgcgagcccgattttctgttctccggagagatacaaaagatcatc
gactccacattgaatcaattaccgaagaaaacacgacggatattcctgatgagccgtgtt
gaaggattttcatacagtatgattgcccgaaaaatggatctcagtcagaaatctatagaa
tatcacatttcgaaggctcttgagctgctgcgtgaatcgttgaaagattttatgtaa
DBGET
integrated database retrieval system