Proteiniphilum saccharofermentans: PSM36_1543
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Entry
PSM36_1543 CDS
T04672
Name
(GenBank) DEDDh 3'-5' exonuclease domain family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac03030
DNA replication
psac03430
Mismatch repair
psac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSM36_1543
03430 Mismatch repair
PSM36_1543
03440 Homologous recombination
PSM36_1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psac03032
]
PSM36_1543
03400 DNA repair and recombination proteins [BR:
psac03400
]
PSM36_1543
Enzymes [BR:
psac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSM36_1543
DNA replication proteins [BR:
psac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSM36_1543
DNA repair and recombination proteins [BR:
psac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSM36_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DUF2095
Motif
Other DBs
NCBI-ProteinID:
SCD20363
UniProt:
A0A1R3SVL6
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All DBs
Position
I:1944179..1944949
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AA seq
256 aa
AA seq
DB search
MKLNLRNPLVFFDLETTGINITRDRIVEISFLKVHPNGKEEVRSRRINPEIPIPPQATAI
HGITDDDVKDCPTFKQVARSLADQLEGCDLAGFNSSRFDVPMLAEEFLRAGVDFDMSKRK
FVDVQIIFHKKEQRTLEAAYAFYCNKKLENAHSAEADTIATYEVLKSQLDRYPDLENDIE
VLSKEYSSFNNNVDFAGRFVYDEKGVEVFNFGKHKGRPVSEVLKNEPSYYAWMMDGDFPL
NTKQVLTKIRLREMNS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaatcttaggaatccgttggtcttcttcgatttggagacgaccgggatcaac
atcactcgcgaccgtattgtagagatatcatttttaaaagtccatcctaacggaaaggag
gaagtaagatcgcggcgtatcaatcccgagatacctattcctccccaggctacagcgatt
cacggtatcactgatgatgacgtgaaagattgccctacctttaaacaggtggcgcggtca
ctggccgaccaactggaagggtgtgacctggccggcttcaactcgagccggtttgatgtg
ccgatgctggcggaagagttcctccgagccggtgtggattttgatatgagtaaacgtaaa
tttgtggatgtgcagatcatcttccataaaaaggaacagcgtacactcgaagcggcatat
gccttttattgcaataaaaaactggagaatgcacattctgccgaagcggataccatcgct
acttatgaagtgttgaaatctcaactcgaccgttatcctgatctggagaatgatatcgag
gtgctatcaaaagagtattcgagtttcaataataatgtggattttgccggacggtttgtc
tatgatgagaaaggggtagaagttttcaattttgggaaacataaagggaggccggtgtca
gaagtccttaaaaatgaaccgagttattatgcctggatgatggatggtgatttcccgctc
aataccaaacaggtgcttactaaaatcaggcttcgtgagatgaatagttaa
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