Proteiniphilum saccharofermentans: PSM36_1646
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Entry
PSM36_1646 CDS
T04672
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSM36_1646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psac03019
]
PSM36_1646
03400 DNA repair and recombination proteins [BR:
psac03400
]
PSM36_1646
Enzymes [BR:
psac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSM36_1646
Messenger RNA biogenesis [BR:
psac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSM36_1646
DNA repair and recombination proteins [BR:
psac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSM36_1646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
SCD20466
UniProt:
A0A1R3SVW1
LinkDB
All DBs
Position
I:complement(2067197..2069440)
Genome browser
AA seq
747 aa
AA seq
DB search
MPFGKGRFDYRVICSMEKQDLLYKGLKKYFGFDTFKGNQEAIIRSILSGKDTFVLMPTGG
GKSLCYQLPALLMEGTAIVISPLIALMKNQVDAMRNHSEENGIAHFLNSSLNKQEIEEVK
RDVLSGRTKMLYVAPESLTKTENVEFLRNIPISFYAVDEAHCISEWGHDFRPEYRRIRPI
ISEISVRPIITLTATATPKVQHDIQKNLGMTDAVVFKSSFNRPNLYYEIRNKTEQIDREI
IKYILSQGKKSGIIYCLSRKKVDDFAEILQANDIRALPYHAGMDAATRSNNQDAFLMEKV
DVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGKCIAFYSEKDLQK
LERFMQGKPVSEQEIGKQLLLETAAYAETSVCRRKVLLHYFGEEYNEPNCEHCDNCLNPK
KKVEAKELLITVLEAITALKEKQKADYLINFLIGKESSDIETYGHNELEEFGSGADEEES
TWEVVIRQALLDNYLKKDIENYGILKITKKGKDFLKSPVSFKITKDDEDEDNMTDPESDD
SDVISAGGSGGAADPVLFSMMKDLRKKLSKKLNVPPYVIFQPSSLEAMATSYPITLEELQ
NIPGVGAGKAKRYGKEFVDLIKKHVEENDITRPEDLRVKTVANKSKLKVSIVQAIDRKVA
LDDLAESKGIDFNEMLSEVEAIVYSGTKINIDYFLNEVMDQDVLQDIYSYFKETETDDLE
KAQEELSDYTETEIRLVRIKFFSDMAN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
ttgcctttcggaaaaggcagatttgattacagagtgatttgctcaatggaaaaacaagat
ttattatacaaagggttaaagaaatatttcggattcgatacttttaaaggtaaccaggag
gctataatcagaagtatcttgtccggaaaagacacttttgtattaatgccaaccggtggc
ggaaaatcactctgctaccaactccctgcgctactgatggagggaacggcgattgtcatt
tctccgcttatcgcactgatgaaaaatcaggtggacgccatgcgtaaccacagtgaagaa
aacggtattgcccactttctcaactcctccctcaataagcaggaaatagaagaggtaaaa
agagatgtgctctccggcaggacaaagatgctgtatgtagcgcccgagtcgctcaccaaa
actgaaaacgtggaattcctccggaatatccctatatcattttatgctgtggatgaggcg
cattgtatttcggaatggggtcatgatttccgaccggaataccggcgcatcaggccaatc
atcagtgagatcagcgtacgccctatcatcactttaactgcaacagccacaccaaaggta
cagcacgatatccagaagaatctcgggatgactgacgcggtggtatttaaatcatctttt
aaccgccccaacctctattacgagattcgtaataagactgaacaaatagacagggagatc
attaagtatattctctcccagggcaaaaaatcaggaattatctattgtctgagccgaaag
aaagtggacgattttgcagagatcctgcaagcaaacgatatcagggcattaccttaccac
gccggaatggatgccgccacgcgcagcaataatcaggatgctttccttatggagaaggtg
gatgtaattgtagcgactattgcctttggtatgggaatcgataaacctgatgtacgttat
gtgatccattatgatattcccaagagccttgaaggttattatcaggaaaccggccgtgcc
ggacgcgatgggggtgagggaaaatgcatcgcattctattcagaaaaagacctgcagaaa
ctggagcgtttcatgcagggtaaaccggtctcggaacaggagatcggaaaacaactgctg
ctggaaacagccgcttatgcagaaacatccgtatgccggaggaaagtgctgctgcactac
tttggcgaagagtataacgaaccgaattgtgaacattgtgacaattgtttaaatcccaag
aagaaagtggaagcgaaagagttacttattactgtgttggaagcgattaccgctctcaaa
gaaaaacaaaaggccgattatcttataaatttccttataggaaaagaatcatctgatata
gagacgtacgggcataatgaattggaggaattcggatcgggtgccgatgaagaagaaagc
acctgggaagtagttatccgtcaggcactactcgataactatctgaaaaaagatatcgaa
aactacggtattctcaagattaccaagaaggggaaagacttcttgaaaagtcctgtctca
tttaagataacgaaagatgatgaagatgaggacaacatgaccgatccggaaagtgatgat
tcagatgtgatctctgccggtggaagcggtggtgctgccgaccccgtgcttttctccatg
atgaaggacctgaggaaaaaactgtcgaaaaaactgaacgttcctccttatgttattttc
cagccttcgtcactcgaagccatggccacctcctatcccattacacttgaggaattgcaa
aatattcccggagtgggtgccggaaaagcaaaacgttatggcaaagaattcgtcgatctg
ataaagaaacacgtggaggaaaacgacattacccgtcccgaagatctccgtgtgaagacg
gtcgccaataaatcgaaactcaaagtatctatcgtacaggccattgacagaaaggtggca
cttgacgatttagcggaatcaaaaggtattgattttaacgaaatgctgtcggaagtagaa
gccattgtatattcgggtaccaagatcaatatcgattatttcctcaatgaagtgatggat
caggatgtactgcaggatatttactcctacttcaaagagaccgagacagatgatctggag
aaggcacaggaagaattgtcagattatacagaaaccgaaatacgcctggttcgcatcaag
ttcttctccgatatggcgaattaa
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