Proteiniphilum saccharofermentans: PSM36_1778
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Entry
PSM36_1778 CDS
T04672
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSM36_1778 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psac03019
]
PSM36_1778 (rhlE)
Enzymes [BR:
psac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSM36_1778 (rhlE)
Messenger RNA biogenesis [BR:
psac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSM36_1778 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
CMS1
P-loop_SecA
Flavi_DEAD
Utp25_C
Helicase_C_2
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
SCD20595
UniProt:
A0A1R3T9G3
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All DBs
Position
I:2243266..2244381
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AA seq
371 aa
AA seq
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MTFKELSIVEPVLRALNEKGHTIPTPIQQQAIAPALDNRDILGLAQTGTGKTAAFVLPII
QQLYLNKSQGRKREIRALILTPTRELAIQINECLSDYIRYTGLRHCVIYGGVKQNAQVNA
LKQGIDILVATPGRLLDLMNQKIISLQSIRHFVLDEADRMLDMGFIHDIKRLLPQLPRVK
QTLFFSATMPSSIADLSRSILHKPVRVEVAPVSSVVDTIEQYIYFVEKPEKKNLLIDLLK
KDRKKSVLIFSRTKHGADKIARILSKSGINSAAIHGNKSQNARQKALSDFKSHKIQTLIA
TDIAARGIDINNLELVINYDLPDVAETYVHRIGRTGRAGNTGTALTFCADEERDMLKDIQ
KLTGKTLVVAS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattatctattgtagagccggtattgagggctctgaacgaaaaagga
catacaattcccacaccaatacaacaacaggctattgccccggcacttgacaaccgtgat
atcttaggactggcacaaaccggcacaggaaagaccgcagcttttgtacttcccatcata
caacaactctatttgaataaatctcagggtcgaaaaagagagatcagagcgttgatttta
acacctacgcgggaactggctatccagatcaacgaatgcctgagcgattatatccgctat
acggggcttcgccactgtgtgatttatggtggagtaaagcagaatgcacaggtaaatgca
ttgaaacaggggatagatatattggtagctactccgggacgtctgctcgatttaatgaac
cagaagatcatcagtctccagtctatccgccattttgtgctggatgaagctgaccggatg
ctggatatgggatttatccacgatatcaagcggttgttaccacaactccccagggtgaag
caaaccctcttcttttcggctaccatgccgtcttctatagctgatctctcacgctctatc
ctgcacaagccggtcagggtagaggtggcgccggtatcgtcggtagtggacaccatagag
caatatatctattttgtagaaaaaccggagaagaaaaatctgctgatagacctgctgaaa
aaggatagaaagaaatcggtactgatattttcccgcaccaaacatggagcggataagatc
gcaaggatacttagcaagtccggaataaacagtgcagccatccacgggaataaatcgcag
aatgccagacaaaaggcgctgtctgattttaaatcgcacaaaatacaaacccttatcgcg
accgatattgcagccaggggaatagatatcaacaatctggaactggtcatcaactacgat
cttccggatgtggccgagacctatgtgcatcgcatcggccgcacgggcagggcagggaat
acaggtactgcgttgacgttctgtgccgatgaagagagggatatgttaaaagatatccag
aaattgacgggaaaaacccttgtggtagcaagctaa
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