Proteiniphilum saccharofermentans: PSM36_2360
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Entry
PSM36_2360 CDS
T04672
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psac
Proteiniphilum saccharofermentans
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psac03032
]
PSM36_2360
03400 DNA repair and recombination proteins [BR:
psac03400
]
PSM36_2360
Enzymes [BR:
psac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSM36_2360
DNA replication proteins [BR:
psac03032
]
Prokaryotic type
DNA Topoisomerases
PSM36_2360
DNA repair and recombination proteins [BR:
psac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSM36_2360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
ParE_toxin
Motif
Other DBs
NCBI-ProteinID:
SCD21165
UniProt:
A0A1R3TB18
LinkDB
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Position
I:complement(2964251..2966671)
Genome browser
AA seq
806 aa
AA seq
DB search
MDKNLVIVESPAKAKTIERFLGKDFHVMSSYGHIRDLKKKDFSIDIENGFMPIYEIPADK
KKVVNELKAAAKKAETVWLASDEDREGEAISWHLFDALELKEDKTKRIVFHEITKDAIQQ
AIQNPRKIDQNLVDAQQARRVLDRIVGFELSPVLWRKIKPALSAGRVQSVAVRLIVERER
EIQNFKSEAAYRIVALFTKEENGHQYEIKAEYNKRLKTKAEALVLLEQLKTSAFTVGDVH
VRPAKKSPAPPFTTSTLQQEASRKLGFSVGQTMMVAQRLYESGKITYMRTDSVHLSALAI
GTAKTEISSQYGEKYIKSRQYATQSKGAQEAHEAIRPTYISTHEIDGTAQEKRLYELIWK
RTIASQMADAELERTTADITISNNDGKFVANGEVIKFDGFLRVYLEGTDEENGENEEGML
PPMKKGEQLTMLETNATERFTQRPPRYTEAALVRKMEELGIGRPSTYAPTISTIINREYV
EKGNIEGEERIYNILTLKKGVIKDTHKKEIAGADKNKLIPTDIGMVVNDFLVEYFPSIVD
YNFTAKVEKDFDKIAEGEAQWNKSIADFYKMFHPIVEETSQMRTEHKAGERVLGTDPKTG
RQVSVKIGRYGAMAQIGTQDEEEKPLFASLQKSQSIETITLEETLKLFELPRTVGEFRGK
EVVIGVGRFGPYIRHNNKFVSLPKGVDPLEVRLDEAIELIEAKEKKDKEKVIKTFEEDPD
LQVLNGRYGPYIAYKKSNYKIPKGQKPEELSLEDCRKIIADTDKGKEPKAGKGATKAAAT
KTAAKKSSTGKSSAKKTTKKPSAKKA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaacctggttatcgtagagtcacctgcgaaagcaaagacaattgagaggttt
ctcggaaaggattttcatgtcatgtccagctacgggcatattcgcgatctgaagaaaaaa
gatttcagtatcgatattgagaacggctttatgccgatttatgagattcctgccgataag
aaaaaagttgttaatgagctgaaggcggcggcgaaaaaagctgaaacggtctggctcgct
tccgatgaggaccgcgagggggaggccatctcatggcatctctttgatgcgctggagctg
aaggaggataagaccaaacgtatcgtatttcacgaaatcacaaaggatgccattcaacaa
gcaatccaaaatccccgtaagatcgaccagaacttagtggatgcacagcaggcgcggagg
gtactcgaccgtatcgtgggcttcgagctctcgccggtgttgtggagaaagataaaaccg
gccctctctgccggacgtgtgcaatctgtcgcagtacgcctgattgtcgaaagggaacgg
gaaatccagaatttcaaatcggaagcggcttacaggattgtagcccttttcactaaagag
gagaacgggcatcagtatgagatcaaagccgaatataacaaacggcttaagaccaaagct
gaagcgctggtgctgttagagcaactcaagacatcggcctttaccgtgggcgatgtccat
gttcgtccggcaaagaaatcgcctgcacctccattcacaacctccaccctgcaacaggaa
gcgtcgcgtaagctgggcttctcggtaggacagaccatgatggtggcgcaacgcctttac
gagtcagggaagataacctatatgcgtaccgactcggtacatctctccgcactggcgatc
ggaactgccaaaacggaaattagcagtcaatacggagagaaatatatcaaaagccggcag
tacgctacccagtctaagggtgcacaggaggcgcacgaagctatccgcccgacttatatc
agtacacatgagattgatggtactgcccaggagaagcggctctatgagctgatctggaag
cgtaccattgcttcgcagatggcggatgccgaattggagcgcactactgcagatatcact
atttccaacaacgacggtaaattcgtggctaacggtgaagtaattaaattcgacggattt
ctgagggtctatctggaaggaaccgacgaggagaacggtgaaaatgaagaggggatgctg
cctcccatgaaaaaaggtgaacaactcaccatgctggagacgaatgcaacagaacgcttt
acacaacgtcccccgagatataccgaagcagcattggtgaggaagatggaagaactgggt
atcggacgcccttctacttatgcacctaccatttctaccatcatcaaccgggagtatgtg
gagaaagggaatatagaaggagaagagagaatctataatatccttaccctcaagaaagga
gttattaaagatacccacaaaaaagagattgccggtgccgataaaaataaattaatcccg
actgatatcggtatggtagtaaacgattttctggtggagtatttcccctcgatcgtcgat
tacaattttacggccaaagtggagaaggatttcgataagattgccgagggtgaagcccag
tggaacaaatcgattgccgatttctataaaatgtttcaccccatcgtggaagagacgtcg
cagatgcgcaccgaacacaaagcgggtgaacgggtgttgggtacggatcccaagacgggg
cgccaggtatcggtgaagataggtcgttatggtgccatggcgcagataggaacccaggat
gaagaggagaaaccgctttttgcttcgttgcaaaaatcacaatctatcgagaccatcact
ctcgaagagaccctgaaactgtttgaattaccgcgaacagtgggtgaatttagagggaaa
gaggtggtgatcggggttggtcggtttggtccttatatccgtcacaacaataaatttgtt
tcattacctaagggagtcgatccgttagaggtccggctcgatgaagctattgaactgatc
gaggcgaaggagaaaaaagataaggaaaaggtcatcaaaacttttgaggaagatcccgac
ctacaggtgttgaacggtcgttacggtccctatatcgcctacaaaaaatcgaattataag
attcccaaagggcaaaaaccggaggaactctccctggaagattgccgtaagattattgcc
gatacagataagggaaaggaacccaaagctgggaagggagcaacaaaagcagccgccacc
aagactgcggcaaagaaatcatcgactggaaaatcgtcggcaaagaagacaaccaagaaa
ccatcggcaaaaaaggcataa
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