Proteiniphilum saccharofermentans: PSM36_3270
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Entry
PSM36_3270 CDS
T04672
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac03410
Base excision repair
psac03430
Mismatch repair
psac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSM36_3270
03430 Mismatch repair
PSM36_3270
03440 Homologous recombination
PSM36_3270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psac03400
]
PSM36_3270
DNA repair and recombination proteins [BR:
psac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSM36_3270
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSM36_3270
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSM36_3270
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Gene cluster
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Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
SCD22055
UniProt:
A0A1R3TDH8
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Position
I:complement(4103036..4104751)
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AA seq
571 aa
AA seq
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MTYRWNYSTLTNDQKNRKNELAKELNLHPVLTELLIKRGIETKEEATGFLYPKLNELHDP
FLLPDMDVAIRRIERALGNKERILIYGDYDVDGTTAVSLVYKFFRGITSNIDYYIPDRYD
EGYGISFQGIDYAVETGVKLIISLDCGIKAVSKVAYAKEKGIDFIICDHHMPDDQLPDAV
AVVDAKRLDSTYPYSDLSGCGVGFKLVHAFSQRNGYPFSDIEPLLDLVAVSIASDIVPLT
GENRILMYHGLKQLNSNPSFGLRGIIEICGLQRKHITVNDIVFKIGPRINASGRMMNGKE
AVDLMIENDMTSAREKSKNIDKYNEDRRELDKKITDEAIAYIDNHIDIIQQKSIVIYNET
WHKGIVGIVASRLTEKYYRPAVVLTKSGEMISGSARSVPGFDVYKAIESCRDILENFGGH
TYAAGLTLREENLQAFTERFNMLSFDGVEARMMLPQITVDVEISLSQITPALINGLDLFN
PFGPENENPIFLTREVYDAGNSRLVGKESRHIKLEIVDKTTDRPFPGIAFSQHNFYQRIK
AGLPVDICYTIEENRHGANSFTQLIIRDIKE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacttacagatggaattattcaacccttacaaacgaccaaaaaaatagaaaaaatgaa
ttagcgaaagaattaaatttacatcccgttcttactgaattgcttatcaagagaggtata
gagactaaggaagaagcaaccggattcttgtatcctaaactcaacgagttgcatgatcct
tttctgctacctgacatggatgtagcgatccggcggattgagcgggctctgggtaacaaa
gagcggatcctcatttacggggattatgatgtagatggtactaccgcagtttcgttggta
tacaagttctttcggggaataacaagtaatattgattattacattccggaccggtacgat
gaagggtatggcatttcgtttcaaggaatcgattatgccgtggagacaggcgtaaagctc
attatctctctcgattgtggcattaaggccgtaagtaaggttgcctatgccaaagaaaaa
ggtattgattttattatttgcgatcatcacatgccggatgatcaacttccggatgccgta
gctgttgtcgacgcaaagcggcttgactccacttacccgtacagcgacctgtccggctgc
ggagtcggttttaaattggtgcacgccttttcacagcgtaatgggtatcctttttccgat
attgaaccgctgctcgatttggtggcagtaagtattgcgtctgatattgtcccgcttacg
ggtgagaatcgcatcctgatgtatcatggcctgaagcagcttaattctaatcccagtttc
ggactgcgaggtattatcgagatctgtgggttgcaacgcaaacatattaccgttaacgat
attgtcttcaaaataggtccgcgcatcaatgcttcggggcggatgatgaacgggaaagag
gcggtcgacctgatgatcgagaatgacatgacttctgccagggagaagagtaagaatatt
gataagtataacgaagaccggcgtgagttggataagaagatcacagacgaagcaatagcc
tatatcgataaccatattgatattattcaacagaaaagtatcgtaatttataatgaaaca
tggcataaggggatcgtgggaatcgtggcatcgagactgaccgagaaatattatcgcccg
gcagtggtgcttaccaaatcgggagaaatgatctccgggtctgcccgttcggttcccggg
tttgatgtatataaagccattgaatcgtgtcgtgatatcctggagaactttggaggccat
acctatgctgcaggcctgacattgcgggaagagaatctgcaggcatttaccgaacggttt
aatatgctctcttttgatggtgtcgaggcgcggatgatgttaccccagattactgtcgat
gtggagatatcactttcacagataaccccggcactcataaacgggctcgacttgtttaat
ccattcggccctgaaaatgagaatcccatatttcttaccagagaggtgtatgatgccgga
aacagcaggcttgtgggaaaagaaagccgccatattaagttggagattgtggataagaca
actgacaggccatttcccggcatcgcttttagccagcacaatttctatcaacgtattaaa
gccggcctgccggtggatatttgttataccatcgaagaaaacaggcatggtgccaattcc
tttactcagcttattattagggatataaaggagtaa
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