Proteiniphilum saccharofermentans: PSM36_3480
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Entry
PSM36_3480 CDS
T04672
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSM36_3480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psac03021
]
PSM36_3480
Transcription machinery [BR:
psac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSM36_3480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_ECF
Sigma70_r4
Sigma70_r2
HTH_40
HTH_23
Xre-like-HTH
HTH_38
PF0610-like_N
SAM_SMF
HTH_7
Motif
Other DBs
NCBI-ProteinID:
SCD22263
UniProt:
A0A1R3T1H8
LinkDB
All DBs
Position
I:4386924..4387526
Genome browser
AA seq
200 aa
AA seq
DB search
MQRIEPDIQQLFTRIKEDDKEAFNCLFRLKYESLLFFAKSYLGETGKAGEVVSDLFVWLW
MNHERIGDIGSPEIYLFKSVKNRCLNALRDSSKVVPLDEQPITEQSLADSNPLSRMEHKE
LSARLHALIENLPDQQKQVFKMIKESGLSARQTAKILHLSHRTVETHLYKAVKKLEEEIT
LYLGYSPRKKQMKKIMAVLW
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcaacggatcgaacccgacatacaacaactattcacccgcataaaggaagatgataaa
gaggcgttcaattgtttattccgattgaaatacgagtcactcttgttttttgcgaaaagc
taccttggcgaaacggggaaagcaggtgaggtggtctccgacctgttcgtctggctttgg
atgaaccacgaacgcattggcgacattggttcacccgaaatctatctttttaaaagcgtg
aaaaaccgttgcctgaacgctctaagggattcaagtaaggtcgtgccactcgacgaacaa
cccataacggaacaatcattggccgacagcaatcctctttcaagaatggaacacaaggaa
ctgtcggcaagactgcatgctcttatcgaaaacctgcccgatcagcaaaaacaggttttc
aagatgataaaggaaagcggtctctctgcccgacagacagccaaaattctccacctttca
caccgaaccgtcgagacacatctctataaagccgtgaaaaaactcgaagaggaaatcacc
ctctatctgggctattctccccgcaaaaagcaaatgaaaaagataatggcagtgttgtgg
taa
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