Pseudoalteromonas sp. APM04: MTP24_03020
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Entry
MTP24_03020 CDS
T11363
Symbol
rnr
Name
(GenBank) ribonuclease R
Organism
psad Pseudoalteromonas sp. APM04
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
WHD_RNase_R
OB_RNR_1st
VOZ_N
Motif
Other DBs
NCBI-ProteinID:
UOB74124
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Position
APM04_1:635600..638041
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AA seq
813 aa
AA seq
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MSNQDPNLSREQEKYENPVPSREFILTHLQERSKPANYAQLCEELAVNDEERQIAFKRRL
RAMERDGQLYFNKFKCYALIDEAGLTKGKVIGHRDGFGFLEVEGESKDWFIAKHQMNMVL
HGDIVLAKGTKRGSGSKCDARIIKVLTNERAPIVGRYFVEHGVAVVVAEDPRITQDIMIL
PGNENGARHNQMVQVKITQNPSRNMNAVGKVVDVLGEHLAPGMEIEVALRNHDIPHVWPE
EVDAQVAHLGEFVEDADKQGRVDLRDLPLVTIDGEDARDFDDAVYCEPKKSGGWRLWVAI
ADVSHYVGMNTPLNKEAIARGNSVYFPEQVIPMLPKVLSNGLCSLNPKVDRLCMVAEMTV
SAAGKLSGYKFYEAVMNSHARLTYTKVNAILQNDEKLRDEYAAVVPHLTDLQQMYMALKS
ARQERGAIEFETLETRFVFNAHRKIESIVPVIRNDAHKLIEECMILANVSAAKLLEKHEA
SALYRVHDEPDSEKLGNFTQFLTELGIQSTLGDEPTPKEITQILAKLGERPEAELIQTML
LRSMKQAVYQPDNIGHFGLALSAYAHFTSPIRRYPDLVVHRAIKAVLKAQGQQTSGAYAY
TDDEVDQLGEQCSTTERRADDATREVADWLKCEFMQDHVGDEFNGVISSVTNFGLFIRLD
DLQIDGLIHVTNLGDEFFAHDAAKHCLIGEHSHTVYRLGDKVTVQVASVSLDDRRINLVL
KGDVAQDRYSRRRAPKGKGPASVRSQLKAGKVPGKKSDDKPKGKKKPAGKGKAAGKSAVK
ASEGTAKKKPKKKSAKKPKRPGKNARKRTSPGA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccaagatccaaatctcagtcgagaacaagaaaagtacgaaaaccccgtccct
agccgtgagtttatacttactcatcttcaagagcgttcaaaaccagctaactacgcacaa
ttatgtgaagaactagccgttaatgatgaagagcgtcaaattgcatttaaacgtcgcctt
cgtgccatggagcgtgatggtcagttatattttaataaatttaaatgttatgcacttatt
gacgaagccggtttaaccaaaggtaaagtaataggccacagagacggttttggcttttta
gaagttgaaggcgagagcaaagattggtttattgccaaacatcaaatgaacatggtgtta
catggcgacattgtactagctaaaggtacaaaacgtggctctggctcaaaatgcgatgcc
cgtattattaaagtgcttaccaacgagcgcgcccctattgtagggcgttactttgttgag
catggtgttgcagttgtagtcgctgaagatccgcgtattacgcaagacattatgatttta
ccaggcaacgaaaacggtgcccgccacaaccaaatggtgcaggttaaaatcactcaaaat
cctagccgcaatatgaacgcagtaggtaaagtggttgatgtactaggtgagcatttagcg
ccaggtatggaaattgaagttgcccttcgtaatcacgacattccgcatgtttggccagaa
gaggttgacgcacaagtcgcccacttaggcgaatttgtagaagatgcagacaaacaaggc
cgcgtagatttacgcgacttaccgcttgttacgatagatggcgaagacgcccgcgacttt
gacgacgccgtgtactgtgagcctaaaaaatcgggtggttggcgtttatgggttgctatt
gccgatgtgtcgcattatgtaggcatgaatacaccacttaacaaagaagccattgcacgt
ggtaactcagtgtattttcctgagcaagttatcccaatgctaccaaaagtactgtctaac
gggttgtgttcacttaaccctaaagtagaccgcctttgtatggttgctgaaatgaccgta
tcagcggcaggtaaattgtcgggttataagttttacgaagcggtgatgaattctcacgcc
cgtttaacttacactaaagtaaacgccattttacaaaatgacgaaaagcttcgcgacgaa
tacgccgccgtagtgccacatttaactgatttacagcaaatgtacatggcgctaaaatca
gcacgccaagagcgtggtgctattgaatttgaaaccctcgaaacacgctttgtatttaat
gcacatcgtaaaatagagtctattgtgcctgttatccgcaacgacgcgcacaaactcatt
gaagaatgtatgattttagccaatgtgtcagcggctaaattactcgaaaagcacgaggcc
agtgcactttaccgtgtgcatgatgaacccgacagtgaaaagctaggtaactttacacag
tttttaactgagttagggattcagagcacattaggtgacgaaccaacgcctaaagaaatt
acgcaaatattagctaaattaggcgagcgcccagaggccgagcttattcaaactatgctg
ctgcgctcaatgaaacaagcggtttaccagccagataacataggtcactttggtttagcg
ttatcggcttatgcgcactttacatcgcctattcgtcgttacccagatttagttgtacac
cgtgcaattaaagcggtactaaaagcacaaggtcaacaaacgtcaggcgcatacgcgtac
actgacgatgaagtagatcaattaggcgagcaatgttcaaccactgagcgccgtgcagac
gacgcgactcgcgaagtagccgactggcttaaatgtgagtttatgcaagaccacgttggc
gatgagtttaacggggttatttcgtcggttacaaactttggtttatttatacgattagac
gatttacaaattgatggtttaattcatgttactaatttaggcgacgagttttttgcacat
gatgctgcaaaacattgcctaattggtgaacacagccacaccgtttaccgccttggtgat
aaagtaacggtgcaagttgcctcagtcagtttagacgatcgccgtataaacttagtactt
aaaggcgatgtagcgcaagacaggtattcacgccgtcgtgcacctaaaggtaaaggccct
gcgagtgtacgctcacaattaaaagcaggcaaagtaccgggtaaaaagtcagacgacaag
ccaaaaggtaaaaaaaagccagccggtaaaggcaaagctgctggtaagtcggcggttaaa
gccagcgaaggcaccgcaaagaaaaaaccgaaaaagaaatcggctaaaaagcctaaaaga
ccaggcaaaaatgcccgtaaacgtacaagcccaggagcataa
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