Pseudoalteromonas sp. APM04: MTP24_04975
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Entry
MTP24_04975 CDS
T11363
Name
(GenBank) DEAD/DEAH box helicase
Organism
psad Pseudoalteromonas sp. APM04
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
P-loop_SecA
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UOB74492
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Position
APM04_1:complement(1055166..1056968)
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AA seq
600 aa
AA seq
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MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFA
LPLLNNIDPSVKQPQILVLTPTRELAIQVAEAFEQYAKGTRGVEVLALYGGQSYSIQLSA
LRRGAQIIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVENIMEKTPREK
QTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQVFWNASVHKNKAIVRFLEA
EQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVDRLKSGMLNVVIAT
DVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLLKNIIR
HTKSEIAQVELPTAKVVEEKRIAALQAKLSIALENKDITFFNEVATNMAEKLDLPLENLA
GALLCLAQQQSPIKVEEVKIQPRERNERNSRNDRGDRGRRNERGGERSERKPRERNSRDA
GPMDTYRIEVGREHGVQVKNIVGAIANEADISSKFIGDIRLHDQHSTVQLPQNMPKDVLD
HFQKVFICKRPMGMTITQDQGPAEPRGERPSGDRKRNDGPRGDKRSGPRKERRPVSFTAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccagtcacgtttgaatctctaaatctttctcctgcaattttgaaggcagtt
gaagagttgggttacaagacaccatctgaaatccaagctcaatgtataccgttattgcta
gaaagaaaggacgtactgggactagcacaaacgggtacaggtaaaaccgcagcatttgca
ctgccgttactaaacaatattgacccgtctgtgaaacagccacagatccttgtactcaca
cctacacgtgagcttgcgatccaagttgctgaggcatttgaacaatatgcaaaaggtact
cgtggtgttgaagtattagcactatacggtggccaaagctacagcattcaattaagcgca
cttcgtcgtggcgctcaaatcattgttgctactccgggtcgattaatcgatcatataaac
cgtggcactatcaagtttgatgctcttcaagcacttgtacttgatgaagccgatgaaatg
ttacgtatgggctttatcgatgatgttgaaaacatcatggaaaaaacaccgcgcgaaaag
caaacatgtcttttctctgcgaccatgcctaagcaaattcaaaacatcagcagcaaatat
atgaataaccctgaacaggttcatatttctgcgcgtaactcgacagtatcgtctgttgag
caagtgttttggaacgcaagcgtacataaaaacaaagcgattgttcgctttttagaagct
gagcaatacgaaggtgctattgttttcgtacgtacacgtaacgataccgttcaacttgct
gaattattagagcgcgaaggtttctctgcagctccgcttaatggtgatatgaaccagcaa
gcacgtgaacgcactgttgaccgcttaaaaagtggcatgctgaacgttgttattgcaact
gacgtagcagctcgtggtctcgatgtagaccgtttaagcttagttatcaactacgacatt
ccacaagattctgaagcctacgttcaccgtattggtcgtacaggtcgtgcaggtcgtact
ggtaaagcaattttatttgttaagcataacgaacgttacttacttaaaaatatcattcgt
catactaagtctgaaattgctcaggttgaattaccaacagctaaagttgttgaagaaaaa
cgtattgctgcgttacaagcaaaattaagtattgcgcttgaaaacaaagacattacgttc
tttaacgaagtggctactaacatggctgaaaagcttgaccttcctcttgaaaacttagcg
ggtgctttactgtgtttggcacagcaacagtcgccaattaaagttgaagaagttaagatt
caaccacgtgagcgtaacgaacgcaattcacgtaatgaccgtggtgatcgcggacgtcgt
aacgaacgtggtggtgaacgttctgaacgtaaaccgcgcgagcgtaacagccgtgatgca
ggccctatggatacttaccgtatcgaagtaggtcgtgagcatggtgttcaggttaagaat
attgttggcgcaattgctaacgaagctgatatctcaagtaagtttattggtgacattcgt
ttacacgatcaacacagcactgttcagttaccacaaaacatgcctaaagatgtactagat
catttccaaaaagtgtttatttgtaaacgcccaatgggtatgacaattacacaagatcaa
ggcccagctgaaccacgtggcgaacgcccatctggtgatagaaaacgtaacgatggccca
cgcggtgataagcgtagcggacctcgtaaagaacgtcgcccagttagctttaccgctaag
taa
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