Candidatus Phytoplasma sacchari: O7R10_00470
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Entry
O7R10_00470 CDS
T09130
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
psah
Candidatus Phytoplasma sacchari
Pathway
psah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O7R10_00470 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psah03019
]
O7R10_00470 (rny)
Messenger RNA biogenesis [BR:
psah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O7R10_00470 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
LapA_dom
Peptidase_M10_C
Phage_sheath_domII
Motif
Other DBs
NCBI-ProteinID:
WBL31525
LinkDB
All DBs
Position
complement(116314..117900)
Genome browser
AA seq
528 aa
AA seq
DB search
MKTIIIIFIILFCFGNICSFLLTFFYFKIKKEELKKKIKKIENQIKEKILKSELISEQII
SETNKKNNLLKKEIEIDLNQRRKIIINLEEKIIHKEELLVSRTEYLNKKEESLYKKEQEI
LDKKIEIEKIKNKTKEILDQQQKKIEEIALLSQKEAEIILLNNAKSNIIEEIINFTKEKE
EEFKLQVQKKAKNLLIYTMQSLSKSNIISEHNTSIVFLSDDDIKGKIIGKEGRNIRNFEL
ITGVDLIIEDVPNTVILSSFDPIRREIAKKTLEYLIHDGRITPASIEKTFKKMISEMDNF
IQEIGEIAIYETKIGVIDKEIINLLGKLSFRMSYGQNVLNHSLEVSFLAGKLAAEIGEDE
IMARRAGLLHDIGKALNCKTEGNHVKIGIELAIKYNESKEVIDSIASHHEDQEPNTITAI
LVSIADTVSSSRPGARKESLENYFQRINQLEKIADKIEGVEKSYAIRSGREIRVIVKSQE
TDDTKTLMIAQKIKKEIKKNKKIHNNRTIKITVIREFRIEEKIEGTEE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaataataataatatttattattttgttttgtttcggtaatatatgttctttt
ttattaacatttttctattttaaaataaaaaaagaagaattaaaaaaaaaaattaaaaaa
atagaaaatcaaattaaagaaaaaattctaaaatctgaattaatatctgaacaaattatc
tcagaaaccaataaaaaaaataatttattaaaaaaagaaatagagattgacttaaatcaa
agaagaaaaataattattaatttggaagaaaaaataattcataaagaagaattattagtt
tctagaacagaatatttaaacaaaaaagaagaatcattgtataaaaaagagcaagaaatt
ctcgataaaaaaatagaaattgagaaaataaaaaacaaaacaaaagaaattttagatcaa
caacaaaaaaaaatagaagaaatagctctattaagtcaaaaagaagcagaaataatttta
ttaaataatgctaaatcaaatataatagaggaaataattaattttactaaagaaaaagaa
gaagaatttaaattacaagttcaaaaaaaagctaaaaatttacttatttatacaatgcaa
agtttatctaaaagtaatataatatcagaacacaacacaagtattgtttttttatcagat
gatgatataaaaggaaaaataataggtaaagaaggaagaaatataagaaattttgaactc
ataacaggagtagatttaattatagaagatgttccaaatacagtaattttaagctctttc
gatcctataagaagggagattgctaaaaaaaccttagaatacttaatacatgacggaaga
ataactcctgctagtattgaaaaaacatttaaaaaaatgatatctgaaatggataatttt
attcaagaaataggagaaatagctatatacgaaactaaaataggtgtaattgataaagaa
ataataaatttattaggtaagctgagttttagaatgagttatggtcaaaatgttttgaat
cattctttagaagtatcttttttagcaggtaaattagcagcagaaatcggagaagatgag
ataatggcaagaagagctggattacttcatgatattggaaaagcattaaattgtaaaaca
gaaggtaatcatgttaagataggtattgaattggctataaaatataatgaatctaaagaa
gttattgattctatagcttcccatcacgaagatcaagaaccaaacactataacagcaatt
ttagtatcaatagcagatacagttagttcatctagacccggagcacgtaaagaatcatta
gaaaactacttccaaagaattaatcagttggaaaaaatagctgacaaaatagaaggtgta
gaaaaatcttatgctattcgttcgggcagggaaattagagtaatagttaaatcacaagaa
acagatgatacaaaaactttaatgatagcacaaaaaataaaaaaagaaattaaaaaaaat
aaaaaaatacataataatagaactataaagataacagttataagagaatttagaatagaa
gaaaaaatagaaggaacagaagaataa
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