Candidatus Phytoplasma sacchari: O7R10_00880
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Entry
O7R10_00880 CDS
T09130
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psah
Candidatus Phytoplasma sacchari
Brite
KEGG Orthology (KO) [BR:
psah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psah03032
]
O7R10_00880 (topA)
03400 DNA repair and recombination proteins [BR:
psah03400
]
O7R10_00880 (topA)
Enzymes [BR:
psah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
O7R10_00880 (topA)
DNA replication proteins [BR:
psah03032
]
Prokaryotic type
DNA Topoisomerases
O7R10_00880 (topA)
DNA repair and recombination proteins [BR:
psah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O7R10_00880 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
WBL31602
LinkDB
All DBs
Position
218132..220207
Genome browser
AA seq
691 aa
AA seq
DB search
MKSKVIIVESPTKIKTLNSYFENKILVLSSKGHIRDLSYKGKDNLGIDIKNNFNPMYQII
PKQKELVNKIIKLTKGKQIFLATDPDREGEAIAWHLAEILKLNLKEKNRIIFNEINKKTV
LEALKKPISIKKNLVDSQEARRILDRIIGFKLSQITRKKSAKSAGRVQSVALKLIVEIEE
QRKKFIPEKYYLIKAVFDKFQTYLKINKKEKINTEEQANKIIEDIKNKNFLLNKIKNKKI
INKSPKPFITATLQQEAFKILSMSAKTTMSYAQKLYEGVKIDDSIVGLITYMRTDSHRIS
SIFYDKLNIFIKKEYGSEYLNNYKQEIKKELVQDAHEAIRPTDLSITPHFLKKYLNKYEL
ALYEMIYKRTLASFMSNAIFEQNEFFFSVNKYIFVTNDNKIIFDGFYKILKSDFKMTNLS
FLEKNKTYLPEKIEKIQKETSPPSQFTEASLIKKLENLKIGRPSTYANIIEILKKRFYVY
IEKKKIICTKLGILIKKTLDDFFPSIINIDYTSQIEKKLDEIYYNKISKIDFLKEFYNNF
INLWDLANKKIKKEEIITKEKCSLCNDFLVKRKGKYGEFLGCNSFPQCKNMISLKEKKEE
IITKEKCSLCNDFLVKRKGKYGEFLGCNSFPQCKNMISLKEKKEEIITKEKCSLCNDFLV
KRKGKYGEFLGCNSFPQCKNMISLKEKKEGK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaagttattatagttgaatcgcctactaaaataaaaacattaaatagttat
tttgaaaacaaaattttagttctttcttcaaaaggtcatattagagatttatcgtataaa
ggtaaagataatttaggtatagatattaaaaataattttaatccaatgtatcaaataata
cctaagcaaaaagaattagtaaataaaattattaaattaacaaaaggtaaacaaattttt
ttagctacagacccggatagagaaggcgaagctatagcttggcatttagcagaaatactt
aaattaaatttgaaagaaaaaaatagaataatttttaatgaaattaataaaaaaactgtt
ttagaagctttaaaaaaacctatttctataaaaaaaaatctagttgattctcaagaagct
aggagaatattagatagaattataggtttcaagttatctcaaataactcgaaaaaaatca
gctaaatcagcaggaagggtacaatcagtagctttaaaattaattgtagaaatagaagaa
caaagaaaaaaatttataccagaaaaatattatttaattaaagctgtatttgataaattc
caaacttacttaaaaattaataaaaaagaaaaaataaacacagaagaacaagctaataaa
attattgaagatataaaaaataaaaattttttattaaataaaataaaaaataaaaaaata
ataaataaatctccaaaaccttttattactgctacattacaacaagaagcatttaaaata
ttatcaatgagtgctaaaacaacaatgtcatatgctcagaaattatacgaaggagtcaaa
atagatgattcaatagtaggtttaattacttatatgagaactgattctcatagaatatct
tctatattttatgataaattaaatatttttattaaaaaagaatatggttcagaatattta
aataattataaacaagaaattaaaaaagaattagtccaagatgctcatgaagctattaga
cctacagatttgtcaataactccccattttttaaaaaaatatctaaataaatatgaactt
gctttatatgaaatgatttataaaagaactttagctagttttatgtctaatgctattttc
gaacaaaatgaatttttttttagtgtaaataaatatatttttgtaacaaatgataataaa
ataatttttgatggtttttataaaatattaaaaagtgattttaaaatgacaaatttatca
tttttagaaaaaaataagacatatttacctgaaaaaattgaaaaaattcaaaaagaaact
tctcctccttctcaatttactgaggcttctttaattaaaaaactagaaaatttaaaaata
gggagaccttcaacttatgcaaacattatagaaattttaaaaaaaagattttatgtttat
attgaaaaaaagaaaataatttgtactaaattaggaatattaattaaaaaaactttagat
gattttttcccctctattattaatatcgattatacatctcaaatagaaaaaaaattagat
gaaatttattataataaaattagcaaaatagattttttaaaggaattttataataatttt
attaatctttgggatttagctaataaaaaaataaaaaaagaagaaattataactaaagaa
aaatgttctttatgtaatgattttttagtaaaaagaaaaggaaaatatggagaattttta
ggttgtaactcttttcctcaatgcaaaaatatgatttctttaaaagaaaaaaaagaagaa
attataactaaagaaaaatgttctttatgtaatgattttttagtaaaaagaaaaggaaaa
tatggagaatttttaggttgtaactcttttcctcaatgcaaaaatatgatttctttaaaa
gaaaaaaaagaagaaattataactaaagaaaaatgttctttatgtaatgattttttagta
aaaagaaaaggaaaatatggagaatttttaggttgtaactcttttcctcaatgcaaaaat
atgatttctttaaaagaaaaaaaagaaggtaaataa
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