Candidatus Phytoplasma sacchari: O7R10_01340
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Entry
O7R10_01340 CDS
T09130
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psah
Candidatus Phytoplasma sacchari
Pathway
psah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O7R10_01340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psah03021
]
O7R10_01340
03400 DNA repair and recombination proteins [BR:
psah03400
]
O7R10_01340
Enzymes [BR:
psah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O7R10_01340
Transcription machinery [BR:
psah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O7R10_01340
DNA repair and recombination proteins [BR:
psah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O7R10_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WBL31645
LinkDB
All DBs
Position
complement(309036..309995)
Genome browser
AA seq
319 aa
AA seq
DB search
MGKLKFIKPFMIQEEENYNSFNQRFIIQRLEKGYGITLGNSLRRVLLSSLPGSAIVNVYI
QGVEHEFSVIPGVYEDVMSIVLNLKKVVIYVDSEEDEFEVTMEIDVKGERTVTAADFGPI
EGVNIINKDQVIAHISDNNFHFKMEVTVRRGIGYTNSEENKIYSKNKFGVISIDSLYTPV
LGVTYNVEKKLNNKEELILEIETNKSISSKEALATASKILSDYFYSLAELSEKSKKIDFI
YEPKVKSYNHALDLKIVQLEVSARLFNSLKKSGINTVRELVNQNEKYIAKLHSLGKKSFE
ELKKKMKEFDLSFKPEDDE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
attggaaaattaaaattcataaaaccttttatgatacaagaagaagaaaattataattct
tttaatcaaagatttattattcaacgtttagaaaaaggttatggtattactctgggaaat
tctttaagaagagttttattatcatccttaccaggttctgctattgttaatgtttatatt
caaggtgtagaacatgaatttagcgtcattcctggtgtttatgaagatgttatgtctatt
gttttgaatttaaaaaaagttgttatttatgttgattcagaagaagatgaatttgaagta
acaatggaaattgatgtcaaaggagaaagaacagtaacagctgctgattttggacctatt
gaaggagttaatataataaataaagatcaagtaatagcacatatttccgacaataatttt
cattttaaaatggaagtaactgttagaagaggtattggttatacaaattctgaagaaaat
aaaatatatagtaaaaataaatttggtgtcatttcaatagattctttatatactcctgtt
cttggagttacttataatgtggaaaaaaaattaaacaataaagaagaacttattttagaa
atagaaactaataaatctatttcttcaaaagaggctttagctactgcttcgaaaatttta
tcagattatttttattctttagctgaattatctgaaaaatcaaaaaaaatagactttatt
tatgaaccaaaagttaaaagttataatcatgctttagatttaaaaattgtacaattagaa
gtatcagctagattattcaatagtttgaaaaaatctggtatcaatacagttagagaatta
gttaatcaaaatgaaaaatatattgctaaattgcatagtttaggaaaaaaatcttttgaa
gaattaaaaaaaaaaatgaaagaatttgatctttcttttaagccagaagatgatgaataa
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