Candidatus Phytoplasma sacchari: O7R10_02000
Help
Entry
O7R10_02000 CDS
T09130
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
psah
Candidatus Phytoplasma sacchari
Pathway
psah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O7R10_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psah03019
]
O7R10_02000
Messenger RNA biogenesis [BR:
psah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O7R10_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Sedlin_N
Motif
Other DBs
NCBI-ProteinID:
WBL31362
UniProt:
A0ABY7M220
LinkDB
All DBs
Position
complement(434301..435980)
Genome browser
AA seq
559 aa
AA seq
DB search
MQKEISFSALGGIGENGKNFYLLKIKSSYFILDIGLKYPDILTHGIDSIIPEYTKLDLIK
EKIKAIFITSAFETHSGALPYLIQNLNIPIYASDFVVDVIKNNLKNNNIDVTNIIFHTIN
ENSKINFSDTVVSFFNIAHFLPETLGLSFKTSHGYIIYISEMHFLQSKDKNFQTNFSSLA
KLGEKKVLAFIPASQGAFSIIKQKKKELLEYYLSSYFASIKNNIIISFLIPDLLKIQLAI
NLAVEFNLKIVILGRKSEKIIDLALKKGYLKIPEGFLVDLKNSNDFLKYKNLVIIVVGKR
FEPFYRLQRMCKQTDRLMRLNPQDKILLLSIEVNGIDKIQSKTLDILARSDFIVDILIED
LLTASYNYEENFELMLHLLKPQFLLPVVGEYRHQYQIKKIAQNFNYKEKNIFMFENGDQW
IYDTENKPYIKKKFFKNLGEILIDGTPVLDGNNYILKDRELLANDGVIILVCGISTRIKR
IIGNIELISKGFLDKNKIENMCIQLKEIFIKNICDEFLNNTDHIKWSDFKNNLKETLSKF
VFKETRKKPVIIPVLISVY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagaaataagtttttctgctttaggtggtataggagaaaatggtaaaaatttt
tatttacttaaaattaaatcttcttactttattttagatataggattaaaatatcctgat
attttaactcatggaatagattctattattcctgaatataccaaattagatttgattaaa
gaaaaaattaaagctatttttattacttctgcttttgaaacccattcaggcgctttgcct
tatttgatccaaaatttaaatattcctatttatgcttctgattttgttgtggatgttata
aaaaataatttgaaaaataataatattgatgttacaaatataatattccatactattaat
gaaaattctaaaataaatttttcagatactgttgtttctttttttaatatagcacatttt
ttacctgaaactttaggattatcatttaaaacttcacatggatacattatttatataagc
gaaatgcattttttacaatctaaagataaaaattttcaaactaatttttctagtttagcc
aaattaggagaaaaaaaagttttagcttttataccagcttctcaaggcgcttttagcatt
attaaacaaaaaaaaaaagaacttttagaatattatttgagtagttattttgccagtatt
aaaaataatatcataatttcttttttaataccagatttattaaaaatacaattagctatc
aatttagctgtagaatttaatttgaaaattgttattttaggaagaaaaagtgaaaaaatt
attgatttagctcttaagaaaggttatttaaaaattccagaaggttttttagttgatctt
aaaaattcaaatgattttttaaaatataaaaacttggttataattgtagtaggaaagaga
tttgaacctttttatcgtttacaaagaatgtgcaaacaaacagatcgtttaatgagactt
aatcctcaagataaaattttattattatcaatagaagttaatggtattgataagatacaa
agtaaaacattagatattttagctagaagtgattttattgtagatattttgatcgaagat
ttacttacagcttcttataattatgaagaaaattttgaattaatgttacatttgcttaaa
cctcagtttttattacctgttgtaggtgaatataggcatcaatatcaaataaagaaaatt
gctcagaattttaattataaagaaaaaaatatttttatgtttgaaaatggtgatcaatgg
atttatgatactgaaaataaaccttatattaaaaagaaatttttcaaaaatttaggagaa
attttaatagatggtacacctgtattagatggaaataactatattttaaaggatagagaa
cttttagcaaatgatggagttattattttagtttgtggtatcagtaccagaattaaaaga
attattggaaatatagaattaattagcaaaggttttttggataaaaataaaattgaaaat
atgtgtattcaattaaaagaaatttttattaaaaatatttgtgatgaatttttaaataac
acagatcatattaaatggagtgattttaaaaacaacctaaaggaaacattatcaaaattt
gtttttaaagagactagaaaaaaacctgttataattccagttttaatttcagtttattaa
DBGET
integrated database retrieval system