Pontimonas salivibrio: C3B54_111519
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Entry
C3B54_111519 CDS
T05334
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psai
Pontimonas salivibrio
Brite
KEGG Orthology (KO) [BR:
psai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psai03400
]
C3B54_111519
Enzymes [BR:
psai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
C3B54_111519
DNA repair and recombination proteins [BR:
psai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
C3B54_111519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AVG24457
UniProt:
A0A2L2BS51
LinkDB
All DBs
Position
complement(1483146..1484642)
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AA seq
498 aa
AA seq
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MSATPRFLTSDQLGPHFDDGGPIIVVDNRGVFARRTMHRQKAHLILSALYHRIAQWGDRV
EVHQASYYREVLRGRDIEVINPTSHGLRHMVTELSRDAAITVLPSRGFVTSEEDFSTWVS
GKKPSQLLMETFYRDVRHREGYLMVPDASTGGYLPEGGAYNFDADNRQSPPKGQTTLGLP
EPKWPVEDEIDAWVRAELDQMEASGQASFLGHDGPRVFAATREEALEALDDFLDHRLELF
GPFEDAAMPDDWSMAHSLLSVPMNVGLLDPREVIDRALERYREGGVPLNSVEGFIRQIAG
WRDWVWHLYWHLGPDYVETSNYLSHHTPLPEEFAQLKPELVRSHCIKTVLQEVQQRGWSH
HINRLMVLGNHALQRGIDPAALNQWFVDAFVDGTPWVMPANVVGMSQHADGGVVATKPYT
SGGAYIKKMTQYCQGCPFRPDVRVGENACPFTAGYWAFLNRHREVLRRNHRMSKPLAGLG
RLSDLEPLLEQEATRQAW
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccccacgttttctcacctccgaccagctgggtccacattttgacgatggc
gggccgattatcgtcgtggacaaccgcggggtgtttgccaggcgcaccatgcatcggcag
aaagcccatctgattctctctgcgctgtatcaccggattgcccagtggggtgatcgggtg
gaggtccaccaagccagctactaccgtgaggtgctgcgcggcagagatatcgaagtgatt
aaccccacctcccacggtttgcgccacatggtgacagaactctctcgggatgcggcgatt
accgtgttgccttccagaggttttgtgaccagtgaagaagatttttccacctgggtgtcg
gggaagaaacctagccagttgttgatggaaacgttttatcgcgatgtgcgacaccgtgag
ggctacctgatggtgccagatgcgagtactggcgggtatcttcccgaagggggcgcatac
aactttgatgccgacaatcgccaatcaccccccaaaggtcagacaacgctcgggttaccc
gagccgaagtggcccgtagaagacgagattgatgcgtgggtgcgcgctgagctggaccag
atggaagcctccggccaggccagtttcctcggccacgatggcccgcgagtattcgccgcc
acccgcgaagaagcccttgaggctctggacgattttctggaccaccgactggaacttttt
ggccccttcgaagacgctgcgatgcccgacgactggtcgatggcgcactctttgctcagt
gtccccatgaatgtgggtctactcgatccccgcgaagtgatcgatcgggcgcttgagcgc
tatcgcgagggtggtgtgccgttgaacagcgtggagggctttatccgtcagattgctggc
tggcgcgactgggtgtggcacttgtactggcatttagggcccgactacgtcgagacctca
aattacctttctcaccacacgcccctgcccgaagagttcgcccagttgaagccggagttg
gttcgctcccactgcatcaaaacggtgttgcaagaagtgcagcagcgtggctggagccat
cacatcaaccgattaatggtgttgggtaatcacgccctccaacgcggtatcgatccggct
gcgctgaatcagtggttcgtggatgcttttgtggacgggacgccctgggtaatgcccgcc
aacgtggtcggtatgagccagcacgccgatgggggtgtggtagccaccaagccatacacc
tccggtggtgcctacatcaaaaaaatgacccaatactgccaggggtgcccattccgtcca
gatgttcgagtcggtgagaacgcgtgtccttttacagcgggatattgggcgtttctcaac
cgacaccgtgaggttcttcgacgaaaccatcgaatgtcgaaacccttggcgggcctcggc
cgactgtctgacctggagcctttactggagcaggaggctacgcggcaggcgtggtag
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