Pontimonas salivibrio: C3B54_111552
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Entry
C3B54_111552 CDS
T05334
Name
(GenBank) cold shock ATP-dependent RNA helicase CshA
Organism
psai
Pontimonas salivibrio
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Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AVG24489
UniProt:
A0A2L2BS53
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Position
1524902..1526284
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AA seq
460 aa
AA seq
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MSFSDLGIEPDMVEALLQEGIETPFPIQEQTIPVALSGQDIIGQARTGTGKTLGFGLPLL
QKLGVDPAPGVKALVVVPTRELAIQVAEDLEVASSKRQTQVAAIYGGKAYEGQIEQIDAG
AQVIVGTPGRLLDLISQRKLSIKDVEVMVLDEADKMLDLGFLPDVERLFSHTPALRHTML
FSATMPGPVLTLARRFMTKPLHIRAHDPEETLAQANIKHFVYRAHQLDKDEIIGRILQAE
GRGKTIIFTRTKRGAARLVEELTDRGFPAAAVHGDLSQDARERAMVAFRAGKKDILIATD
VAARGVDVDDVTHVINHTIPEDEKAYLHRVGRTGRANKTGIAVTFVDWDDLHKWALINRA
LEMGIPEPQETYSSSDHLFTDMNITPGTKGRLTATPIPNREKRAGESRSGGNRGGNRGGQ
SAGNQPARATNTTSGSSQTASDGSSRPPRHRRRKSSPPQS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttttccgacctcggcattgagccggacatggtcgaggccctccttcaggaggga
atcgagacccctttccccattcaagaacaaaccattcccgttgcgctttctggccaagac
atcatcggtcaggcacgaaccggaacgggtaaaaccctcggttttgggttacccctctta
caaaagcttggagtggaccccgcaccgggagtgaaagccctcgttgtggttcccacccgt
gaactggccatccaagtcgcggaagacttagaggtcgcctcgtcgaagcgtcagacccaa
gtcgccgcaatctatggcggtaaagcctacgagggacaaatcgaacaaatcgacgccgga
gctcaagtcattgtgggcactcctggtcgactcttggacctcatttcacagcgcaaactt
tccatcaaagacgtcgaagtgatggtcttggatgaggccgacaaaatgttggacttgggc
ttcctccccgatgtggagcgcctcttttcacacactcccgcacttcgccacaccatgttg
ttttcggccaccatgccaggaccggtgttgacactggccaggcgtttcatgaccaaaccg
ctccacatccgcgcccacgatcccgaagaaacactggcgcaggccaacatcaaacacttc
gtctaccgcgcgcaccagctggataaggacgaaattatcggccgtatcctccaggcggaa
ggtcgcggcaaaaccatcattttcacccgcacaaagcgcggtgccgcgcgcctggtcgaa
gaactcaccgaccgtggttttcccgcggcggcagtccacggtgatttgagccaagacgcc
cgcgagcgcgccatggtggcctttcgtgccgggaagaaagacattttgattgccaccgat
gtcgctgcgcgcggtgtcgatgtggatgacgtgacccacgtgattaaccacaccatcccc
gaagatgaaaaggcctacctccaccgggtggggcgcaccggtcgggcgaacaagaccggt
attgcggtgacctttgtcgactgggatgaccttcacaaatgggcactgattaaccgtgcc
ctcgaaatgggtatccctgaacctcaggaaacctattcctcctccgatcatctcttcaca
gatatgaacatcaccccggggacgaagggccgcctcacggcaacacctattcccaaccgg
gaaaagcgtgccggtgagtcacgatcgggtggtaaccgtggcggtaaccgtggcggccag
tcggcaggcaaccagcccgcccgcgcgacaaacaccaccagtggttcttcgcagacagcg
tctgatggttcatcacgtccaccgcggcaccgtagacgaaaaagctcaccaccacagtcc
taa
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