Pontimonas salivibrio: C3B54_11395
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Entry
C3B54_11395 CDS
T05334
Name
(GenBank) DNA topoisomerase-1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psai
Pontimonas salivibrio
Brite
KEGG Orthology (KO) [BR:
psai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psai03032
]
C3B54_11395
03400 DNA repair and recombination proteins [BR:
psai03400
]
C3B54_11395
Enzymes [BR:
psai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C3B54_11395
DNA replication proteins [BR:
psai03032
]
Prokaryotic type
DNA Topoisomerases
C3B54_11395
DNA repair and recombination proteins [BR:
psai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3B54_11395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Extensin_1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AVG23391
UniProt:
A0A2L2BNZ2
LinkDB
All DBs
Position
361743..364565
Genome browser
AA seq
940 aa
AA seq
DB search
MPEGKKLVIVESPAKAKTIGKYLGDDYEVMASVGHVRDLAQPKELPAELKKTSLGRFAVD
VDNGFEPYYVTTERGRKTVSDLKKAAKGATEIYLATDEDREGEAIAWHLLELLKPKVPVK
RMVFHEITEDSIRSATSDTRDVDTALVDAQETRRIVDRLYGFEVSPVLWRRVSGAKSAGR
VQSPALRLIVDRELERRAFIPAVYSDVKATVETGAGESFVASVARLDGTRVASGRDFSSE
GELKDGVRLIDPEVATALVKALEAPGSTLEVAAIDPKPYTRRPAAPFTTSTLQQEAGRKL
RFSAQQTMSVAQGLYENGYITYMRTDSVSLSQQAISAARAQAKQMFGPSSVPDSPRLYKG
KSQNAQEAHEAVRPAGEAFKSPDELSGVLRPDELKLYELIWRRTVASQMVDAKGQTVTVT
LGAADVEVGGSPVTVELTASGTVLFERGFLQAYEESNDDDKDDDGKSAVLPKMEQGERLG
VTEVSAKAHETQPPARFTEASLVKALEERGIGRPSTYASIISTIIDRGYVSRRGSAMIPQ
WIAFPVTRLLSERFSELVDYQFTAELEEDLDRIARGEYSRQEWLQRFYFGDDDHRGLKDV
ALLATEEIDTRELNTIAITDTISLRVGKYSPFLETLDEETGEVRRVNLPPELAPDELTPQ
KAQELIDAPPVEDRVLGIDPESLREIVAKKGRFGPYVTEVIPEDEAEAAQGKKKTAVKPK
TASLFQAMDIETIDLDTALKLLSLPREVGPDPESGEMITAQNGRYGPYLKKGTDTRSLDS
EDLIFEIDVPGAVARFAEPKYGGRRQTPPLKTLEVDSNTGKAITVKNGRFGPYVTDGETN
VTVPRGIDPAAIDQETAERMLAEKRAKGPAPKRAAKKPAAKKTPVKKPAAKKTPVKKPAA
KKPAAKKTTSATTTVKNAGAKKAAAKSGTKTGNPSSKDEG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagggcaagaaactagtcattgtcgagtcgcccgccaaagcaaaaactattggt
aagtatttgggtgacgactacgaagtgatggcttcggtgggtcacgttcgcgatttggcc
caaccgaaagagttgccggccgagttgaaaaagacgtcactgggtcgcttcgccgtcgat
gtggacaacggtttcgagccctactacgtcaccaccgagcggggtcgaaagaccgtgtcg
gatctgaaaaaggctgccaagggcgccaccgaaatttacctcgcaacagatgaagaccgc
gagggtgaagccatcgcctggcacctgttggagttgttgaaaccaaaagttccggtcaag
cgcatggtcttccacgaaatcaccgaagactcgattcgtagtgcaacatctgacacccgc
gatgtcgacaccgcgttggtcgatgctcaagaaaccagacgcatcgtggatcgcctttac
ggttttgaggtctcaccggttctgtggcgacgggtctctggcgccaaatcggcgggccgt
gtgcaatcacccgctcttcgcctcattgtcgatcgcgaactggagcgccgggcgtttatc
cccgccgtctattcggatgtgaaagccaccgtcgaaacgggtgccggcgaatcttttgta
gcgtcagtggccaggctggatggtacccgggtggctagtgggcgagatttctccagtgag
ggtgaactcaaagacggcgtgcgcctgattgaccccgaagtggcgacggctctagtgaaa
gcgttggaggcacccggcagcacgctcgaagtggcggccattgacccgaagccttacacc
cggcggccggcggctccttttacgacgtccaccttgcagcaagaggccggacgaaaactt
cgcttttctgctcagcagaccatgagtgttgcccaggggctctacgaaaacggttacatc
acttatatgcgaaccgattcggtgagcttgtcccagcaagctatttcggcggcaagggcc
caagcgaaacaaatgtttggtccctccagcgttcccgattcacccaggctttataaaggc
aagtcccaaaacgcccaggaagcacacgaagcggtgcgtcccgcgggtgaagccttcaaa
tcacccgacgagctttcgggggtgttgcgccccgacgagttgaaactctacgaactcatt
tggcggcgcactgtggccagccaaatggtggatgccaaaggtcaaaccgtcaccgtgaca
ctgggtgctgcggacgtggaagttggcggcagcccggtcaccgtcgagctcacggcgtct
ggaaccgtgttgttcgagcgtggcttcctgcaggcttacgaagagagcaacgacgacgat
aaagacgacgacggtaaatcggctgtgttgccgaaaatggagcagggcgaacgcctcggg
gtgacggaggtgtcggcgaaagcccacgaaacgcaaccccctgcgcggtttactgaagca
agcctcgtcaaagctctcgaagagcgtgggattggtcgaccctccacctacgcatccatc
atctccacgattattgatcgcggttatgtctcccgccgcggaagcgccatgattccccag
tggattgcgttccccgtcacgaggctgctctcagagcgctttagtgaactggtcgactac
cagttcactgccgagttggaagaagacttggaccggattgcccgcggcgaatactcacgc
caagaatggttgcagcggttctattttggtgacgatgaccaccgtgggctaaaggatgtt
gccctgctggcgaccgaagaaattgatacccgtgagctgaacaccatcgccattaccgac
accatttcactgcgagtgggtaaatacagtcccttcttagaaaccctcgatgaagaaacc
ggtgaagtccggcgggtgaatttgccgcccgagcttgcccctgatgagttaaccccccaa
aaagctcaagagctgattgatgcgcccccggtcgaagaccgggtgctgggtattgatcca
gaaagcctgcgggaaattgtcgccaaaaagggccgcttcggcccctacgtcaccgaagtc
attccggaagatgaggcagaagcagcgcaagggaagaaaaagactgcggtgaagcccaaa
acggcgtccctgttccaagcaatggatatcgaaaccattgatttggacacggccttgaag
cttctatccctgccacgagaagtgggacccgaccccgaatcgggtgaaatgattaccgcc
cagaacgggcgctacggaccgtatttgaaaaagggcaccgacacgcgttcgttggatagc
gaagacctcattttcgagattgatgtgcccggtgcggtggcacgttttgcggagcccaaa
tacggtggccgcaggcaaacaccaccgctgaaaaccctcgaggtcgattcgaacaccggt
aaagccatcacggtcaaaaatgggcgttttggtccctatgtgaccgatggagaaaccaac
gtgaccgtgcccagggggattgaccctgcggcaatcgatcaggaaaccgctgaacggatg
ttggccgagaaacgcgcgaaaggtccggcaccaaagcgtgctgccaaaaaacctgcggcg
aaaaaaacgccagtaaagaagcctgccgcaaaaaagacaccggtgaagaaacctgccgcg
aaaaaaccagcggccaaaaagaccacgtcagccacaacaacagtgaagaacgcaggcgcc
aagaaggccgccgcaaagtccggtacgaagacaggcaatccctcatcaaaggatgaggga
tga
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