Piscirickettsia salmonis: PSLF89_1603
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Entry
PSLF89_1603 CDS
T03982
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psal
Piscirickettsia salmonis
Pathway
psal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSLF89_1603 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psal03400
]
PSLF89_1603 (ruvB)
Enzymes [BR:
psal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSLF89_1603 (ruvB)
DNA repair and recombination proteins [BR:
psal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSLF89_1603 (ruvB)
RecFOR pathway proteins
PSLF89_1603 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_14
nSTAND3
AAA_16
NTPase_1
RNA_helicase
AAA_24
Bac_DnaA
ABC_tran
Rad17
TIP49
AAA_18
AAA_2
Sigma54_activ_2
TsaE
AAA_17
DUF815
NPHP3_N
NB-ARC
AAA_28
AAA_33
NACHT
HTH_15
RsgA_GTPase
AAA_PrkA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AKP73468
LinkDB
All DBs
Position
1069184..1070194
Genome browser
AA seq
336 aa
AA seq
DB search
MVEHDRIVTVLEHQEDEPTVDRAMRPKLLCDYQGQPAVCEQMQVFIHAARKRQEALDHTL
LFGPPGLGKTTLAHIIANELEVNIKQTSGPVIDKAGDLAALLTNLEENDVLFIDEIHRLS
PAIEEVLYPAMEDYQIDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGITQ
RLEFYSVEDLTRIILRSARVLGISLDNSGAYEIAKRSRGTPRIANRLLRRVRDFADFDGV
VQVNAQMADKALKILDIDEQGLDLMDRKLLNAIFVKFEGGPVGVDSLAAAIGESRDTIED
VLEPYLIQMGLMMRTPRGRVTTSHAAHYLGLAPDIS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacatgatcgtatcgtgacggtgttagagcatcaagaagatgaaccgactgtc
gaccgtgcaatgcgtccgaaacttctgtgtgattaccaagggcagcctgcggtctgtgag
cagatgcaggtgtttattcatgcggcgcgcaaacgtcaagaggcattggatcatacgtta
ttatttggtccaccggggttaggaaaaacaacattagctcacattatagccaatgaactg
gaggtcaatattaagcaaacctcagggccggtaattgataaagcgggggatttggccgcg
ttattgacgaatttagaagaaaacgatgtattatttattgatgaaattcaccgtttaagc
ccggcgattgaagaagtgttgtacccggcaatggaggattatcaaattgatattatgatt
ggtgaaggtcctgcggctcgctctattaagcttgatttaccgccgtttactctagtcggg
gcgacgacgcgcgctggcttgttaacgtcgccgttgcgagatcgttttggcattactcag
cgtttagagttttattcggtagaagatttaacacgtattattttgcgctctgctcgggta
ttgggtattagtttggacaacagtggggcctatgaaatcgctaaacgctcacgtggtacg
ccacggatcgccaatcgattgttgcgccgggtacgtgattttgctgactttgatggtgtt
gtgcaagttaatgcccagatggcagataaagcgttgaagatattggatattgatgaacaa
ggtttagatttgatggatcgtaaattactcaatgctatctttgttaaatttgaaggtggg
ccggtgggtgtggatagcttagccgcagcgattggtgaatcacgtgatacgatagaagat
gttttagagccttatttaattcaaatgggcctgatgatgcgtacccctcgtgggcgagtg
acgacatcgcatgctgcacattatcttggcctggcgccagatataagttaa
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