Piscirickettsia salmonis: PSLF89_2040
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Entry
PSLF89_2040 CDS
T03982
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PSLF89_2040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
nSTAND3
Sigma54_activat
AAA_33
ResIII
Mg_chelatase
AAA_28
Cytidylate_kin
AAA_2
IstB_IS21
ABC_tran
RNA_helicase
AAA_18
AAA_30
Sigma54_activ_2
AAA_24
AAA_17
AAA_3
Cytidylate_kin2
Rad17
DUF815
SRP54
AAA_7
TsaE
AAA_25
NACHT
SKI
NPHP3_N
RsgA_GTPase
DUF5906
Motif
Other DBs
NCBI-ProteinID:
AKP73814
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All DBs
Position
complement(1480200..1481558)
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AA seq
452 aa
AA seq
DB search
MRDLFDDTLTTAPLAHRIRPKNLNEIIGQEHLTSGPLSSAHLLQGCPSLILWGPSGTGKT
TLARLLAKHIHAEFIERSAIMAGLKEIRSAAEQARKNQQDNKQTLLFIDEIHRFSKSQQD
AFLPFVEEGLFTLIGATTENPSFEINRALISRLHVYKLHTLDPSHLEQILERALHHPAGF
GHYTIQFPENLRNKLIDYAAGDARRLLNGLEQLVQINYPSNTDAITHPVIQITAAHFNDF
LGENIGHFDKGGDQFYDLISALHKSIRGSHPNAALFWLARMLHGGCDPLYIARRLVRTAS
EDIGNADPRALQLTLNAWDVIERLGSPEAELALAHAVTYLACAPKSNAVYSAFKSAMQDA
KNHPGVQVPLHIRNAPTALMQDFNHGKNYRYAHDEPYSYAAGENYLPDGMQGHCYYYQPK
ESGLEKNIKSRLDFLSQLDHQYFANIKKQNKA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacttatttgatgataccctaacaacagctcctctcgctcaccgcatacgtcca
aaaaatttaaatgaaatcattgggcaagagcacctcacctccggaccactgagctcagcg
cacctactacaaggctgcccctctctaatactctggggacctagtggcaccggtaaaacc
acactagcacgcttattagctaagcacattcacgctgaatttatcgaacgctctgccatt
atggccggtcttaaagagattcgtagcgctgccgagcaagcacgaaaaaatcaacaagat
aacaaacaaactctgctatttattgatgaaattcaccgcttttccaaatctcaacaagat
gcttttttgccttttgtcgaagaaggcttatttacactcattggcgcaaccacagaaaac
ccctcgtttgaaatcaaccgtgcgctaatctcacgcctacacgtctataaactacacacc
ttagaccccagccatttagaacaaatactcgaacgtgcactacatcatcccgcaggcttt
ggtcattatacgattcaatttccagaaaatttgcggaataaactcattgactatgctgca
ggagatgccaggcggttactcaatggtttagagcagctcgtccagattaattaccctagt
aatacagatgccatcacgcatccagtgatacaaatcacagcagcacattttaacgatttc
cttggtgagaatattggacactttgataaaggcggtgatcagttttatgatttaatttct
gccctccataaatcaattcgcggctcacatcccaatgcagctcttttttggctcgccaga
atgttacatggtggttgtgatccactgtatattgctcgccgcctcgtgcgtaccgcctct
gaagatattggcaatgctgacccacgtgctttgcaactgacgttaaatgcctgggatgtt
atcgaacgtttaggctcacctgaagccgagcttgccctcgcacatgcagtcacttattta
gcctgcgcacctaaaagtaacgctgtatatagtgcatttaaatctgccatgcaagatgct
aaaaatcaccctggcgtccaggtaccattacatattcgtaatgctccaacagcgctgatg
caagattttaaccatggcaaaaactatcgctatgctcacgatgagccatatagctatgca
gcaggggaaaactatttaccagatggtatgcaaggccattgctattattatcagccgaaa
gagtcagggcttgaaaaaaacatcaaatctcgtttagattttctcagtcagctagaccat
cagtactttgctaatattaaaaaacaaaataaagcataa
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