Piscirickettsia salmonis: PSLF89_2108
Help
Entry
PSLF89_2108 CDS
T03982
Name
(GenBank) spore coat assembly SafA domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psal01011
]
PSLF89_2108
Enzymes [BR:
psal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSLF89_2108
Peptidoglycan biosynthesis and degradation proteins [BR:
psal01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSLF89_2108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
OapA
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AKP73870
LinkDB
All DBs
Position
complement(1540343..1542286)
Genome browser
AA seq
647 aa
AA seq
DB search
MKNTFYPSATIAMLALTLTACTTTSTIQKNNVLQHNQAHLASKSTAAYTVTPISNSIASL
TPITPIENLAAGPITEDPDVELWQRIRQHFSLNHYNNIPRVQYYIHWYLKHAKDFNTSIE
RATPFLYYIVEQVEERHMPMEIALLPLVESGFRPSVSSSAGASGLWQLMPITASRFGVKQ
NWWYDGRFDIGKSTRSALNYLLYLHNFFDGNWLLALAAYNSGEGTVQQAITKNMRAHKPT
AYWNLALPRETRDYVPKLLAAAAIIANPETYHINIPQIENKPQIMPIDMGGQVNLAQVAK
YAGISVDEVNRLNPGYTRLITSPKGPHILWLPIAAAKRLESHMNQHPKKQLLSWHRYRVQ
PGDTISAIANKLDIPTRMLSEVNQLNGHLIYPGQFLLYPAPKATHHVKNNNNSPKPHVAT
VSSATTTPPKLYTVRSGDSLWVISKRYRIHLADLKKWNPTIQEQNLNIGQTLHLQPTVST
KIKHQLVTHKSSDAPYFVQAGDSISTIAQKFNISTDQLKTWNNLKSSHIYPKQKLLVKAP
KATMLTYKVKSGDTLYRISQLFDVNISDIMYWNHLSNNNIHPGQQLKIAQNQENHISKVA
YKVRNGDTLYSISRHYDTTVANLQHWNKLSNNSIKIGQALTIYTDTA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgttttatccttctgctacaattgcaatgctagcacttactcttacggcc
tgcactacaacatcaacgattcaaaaaaataatgtactccaacataatcaggcacaccta
gcttcaaaatcaacagcagcttatacagtgacccctatttctaattctattgctagcctt
acaccaatcaccccaatagaaaatttagctgccgggccaatcaccgaagatccagatgtt
gagctatggcagcgtattcgccaacatttttcattgaatcactataataatataccgcgg
gttcaatattatattcattggtacttaaagcatgcgaaagatttcaacacaagtatagaa
cgagcaacaccttttctttattatatcgttgaacaagttgaagaacgccacatgcccatg
gaaatcgctttgcttcccttggttgaaagcggctttcgccctagcgtctcatccagcgca
ggagcctctggattatggcagttaatgccaattactgcctcgcgctttggtgtcaaacaa
aattggtggtatgacggacgctttgatattggcaaatctacccgctcagcacttaattat
ttactctatctacataattttttcgatggcaactggctgcttgccttagcagcctataac
tctggagaaggaacagtacaacaagctattactaaaaatatgcgcgcccataaaccaacc
gcatattggaatttagccttaccacgagaaactcgcgactatgtccctaaactacttgcc
gcagccgccattattgctaatccagaaacctatcatattaatatcccccaaatagaaaat
aagccacaaattatgcccattgatatgggtggacaagttaaccttgctcaagtagcaaaa
tatgcgggtatcagtgtcgatgaggtgaatcgtttaaaccctggatatacccgcttaatt
acctcacccaaaggcccccatattctttggctacccattgctgcggcaaaacgccttgaa
agtcatatgaatcaacatccgaaaaaacaactgttatcttggcaccgttatcgtgttcag
cccggtgataccatcagtgctattgcaaacaagttagatattcctactcgtatgttaagc
gaagtgaatcaattaaatggccacttaatttatccagggcaattcttgctctatccggcc
cccaaagcaacccatcatgttaaaaataataataactcgccaaaaccacatgtagctact
gtaagcagtgccacgacaacaccccctaaactctatacagtccgctctggtgatagcctc
tgggtgatcagcaaacgctatcgcattcaccttgcagacctaaaaaaatggaatccaaca
attcaagaacaaaacttaaatattggccaaacattgcatttacaaccaacagtctcaaca
aaaataaaacatcaacttgtgactcataaatcatccgatgcgccttattttgtccaagca
ggcgactccatttcaacaattgcacaaaagtttaatattagcaccgatcaattaaaaacc
tggaacaacttaaaatctagccatatttatccgaaacaaaaactgctcgttaaagcaccc
aaagccacaatgctcacttataaagtcaaatcaggagatactttataccgtatttctcaa
ctttttgatgtcaatatcagtgatattatgtactggaatcatttaagcaataataatatt
catccaggtcaacaactgaagattgctcaaaatcaagagaatcatattagcaaggtcgcc
tataaagttcgtaatggcgataccctgtactccattagccgccactatgatactacagtt
gctaatttacaacactggaacaagttaagcaacaacagcattaaaattggccaagcactt
actatttatactgacacagcttaa
DBGET
integrated database retrieval system
