Piscirickettsia salmonis: PSLF89_2177
Help
Entry
PSLF89_2177 CDS
T03982
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psal
Piscirickettsia salmonis
Pathway
psal03030
DNA replication
psal03430
Mismatch repair
psal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSLF89_2177
03430 Mismatch repair
PSLF89_2177
03440 Homologous recombination
PSLF89_2177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psal03032
]
PSLF89_2177
03400 DNA repair and recombination proteins [BR:
psal03400
]
PSLF89_2177
Enzymes [BR:
psal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSLF89_2177
DNA replication proteins [BR:
psal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSLF89_2177
DNA repair and recombination proteins [BR:
psal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSLF89_2177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKP73928
LinkDB
All DBs
Position
1602839..1603552
Genome browser
AA seq
237 aa
AA seq
DB search
MADRKIVLDTETTGLETKDGHRIIEIGCIELINRRLTGNNYHVYINPERVVDEEAIAVHG
ITNEFLQDKPVFAQIANEFYHYIQGAELVIHNAVFDIKFIDHEFKLFDRSLNQVRDICSV
IDSLALARRMHPGQKNNLDALCRRYDIDNSKRELHGALLDAGILTDVYLAMTGGQTSLSL
GQESADALDENDQTVDQPARVRQINRSGINLAVVTASTDEFDQHIQYLNTLGIETWS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaaaattgtcttggatacagagacaaccggtttagaaacaaaagatggc
caccgaattattgaaattggctgtattgagttaatcaatcgccgtctgacaggcaataac
tatcatgtctatattaatcctgaaagagttgttgatgaggaagcaattgcagtgcatggc
ataaccaatgagtttttacaggataaacccgtatttgcacagatcgccaacgaattctat
cactatattcaaggggctgagttggttattcacaatgcagtctttgatattaaatttatt
gaccatgagtttaaactatttgaccgtagtttaaatcaagttcgcgatatatgttcggtt
atagatagcttggccctggctagacgtatgcatccggggcaaaaaaataatctcgatgca
ttgtgtcgccgctatgacattgacaactctaaacgtgaactgcacggtgcattgctagat
gctggaattcttactgatgtttatttggcaatgaccggaggacaaactagtttatcccta
ggccaagagtcagctgatgcattagatgaaaatgatcaaaccgtagaccaacctgctagg
gtacgtcaaattaatcgatctggaattaaccttgctgtagttacagcatcaactgacgag
tttgatcaacatatacaatacttaaacaccttgggcattgaaacttggtcttaa
DBGET
integrated database retrieval system
