Piscirickettsia salmonis: PSLF89_272
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Entry
PSLF89_272 CDS
T03982
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psal03021
]
PSLF89_272 (nusA)
03009 Ribosome biogenesis [BR:
psal03009
]
PSLF89_272 (nusA)
Transcription machinery [BR:
psal03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PSLF89_272 (nusA)
Ribosome biogenesis [BR:
psal03009
]
Prokaryotic type
rRNA transcription factors
PSLF89_272 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
RNA_pol_A_CTD
KH_KhpA-B
DUF6225
DUF4609
Motif
Other DBs
NCBI-ProteinID:
AKP72446
LinkDB
All DBs
Position
complement(2920307..2921824)
Genome browser
AA seq
505 aa
AA seq
DB search
MGNKEILFIVEAISNEKGVDKDIIFEAVETALAAATRKRSGIDMDVRVDIDQKTGDYDTY
RRWTVIDDDEVEDTLESPDREVWLSVHRQENAEAKPGDIIEEPMESIEFGRIAAQTARQV
IMQKVREAERNKIAEAYLSRVGELVSGVVKRATRESIIIDLGTAGAEAMLPREQMIDREI
FRPGDRVRAYLMEVRKEARGPQLILTRASNEFLLELFKIEVPEVSEELIEIKAVARDPGL
RAKVAVKTNDQRLDPIGACVGMRGARVQAISGELNNERIDIVLWDDNPMQLVINAMSPAE
VDSIVVDEDSHSMDIAVAEESLSQAIGRNGQNVRLASGLTGWTLNVMSVNDANEKNQAEV
EKLLKTFIDKLGIDDETAEVLIEEGFASIEEIAYVPQQEMMELEGFDEEIVTELRQRAKD
ALLTQELADEAQLEEFGLTDELLNMEGMTRDLALKLAKHEILTMDDLAEQAVADLLEITT
ELNEKEAGQLIMTARAPWFAEDNKD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataaagaaatcctgtttattgtcgaggccatttcaaatgagaaaggtgtcgat
aaagacattatttttgaggctgtggagactgcattggctgcagcaacacgcaagcgtagt
ggcattgatatggatgtgcgcgttgatattgatcaaaaaaccggggactacgatacctat
cgtcgttggacagtcattgatgatgatgaggttgaagatacattagagtcgccagatcgg
gaggtttggctgagtgtgcatcgtcaagaaaatgctgaagcaaagccgggtgatattatt
gaagaaccgatggagtcgattgagttcggtcggattgcagctcaaacggcgcgtcaggtg
attatgcaaaaagtccgtgaggctgagcgtaataaaattgctgaagcctatttgtctcgt
gtcggtgaactggtttcaggtgtggtcaaacgagcaacccgtgagagcattatcattgat
ctaggtacagcgggtgctgaggcgatgttgccacgggagcagatgatcgaccgggaaatt
ttccgcccaggcgatcgtgtacgagcatatctgatggaagtccgtaaagaagcacgtggc
ccacagttgattttaacgcgtgccagtaatgaatttttattagaattatttaaaattgaa
gtccctgaagtatcagaagagcttattgagattaaagcggttgcgcgtgacccagggttg
cgggcaaaagttgcagtgaaaaccaatgaccagcgcttagatccgattggcgcttgtgtg
ggcatgcgtggtgcgcgtgtgcaagcgatttcaggtgagttaaataatgagcgaattgat
attgtcctttgggatgataatccgatgcaactggtgattaatgcgatgagtccagctgaa
gtggactctattgtggttgatgaagatagtcatagtatggatattgctgtggccgaagag
tcgctctctcaagcgattggtcgcaatggtcagaatgtgcgtttagcctctggtctgacg
ggttggacactaaatgttatgagcgtaaatgatgcgaatgaaaagaaccaggcggaagtt
gaaaaattattaaaaacctttattgataagctcggcattgatgatgaaactgctgaggtg
ttgattgaagaaggttttgcgtcgatcgaagagatcgcctatgtaccacagcaggaaatg
atggagcttgagggctttgatgaagagatagtaacggaattgcgtcagcgcgctaaagat
gcactgttaactcaagagttagctgatgaggcgcaacttgaggaatttggcttgactgat
gagttactcaatatggaagggatgacacgagacttagcgctgaagttggctaagcatgaa
attttaacgatggatgatttagccgagcaagcagtggccgatttacttgagatcacaaca
gaactcaatgagaaagaagcaggtcagcttattatgacggctagagcaccatggtttgct
gaggacaataaagactaa
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