Piscirickettsia salmonis: PSLF89_275
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Entry
PSLF89_275 CDS
T03982
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psal03016
]
PSLF89_275
Enzymes [BR:
psal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSLF89_275
Transfer RNA biogenesis [BR:
psal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSLF89_275
Prokaryotic type
PSLF89_275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKP72449
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All DBs
Position
complement(2916269..2917213)
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AA seq
314 aa
AA seq
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MARRNKGRALNGILLLDKPTGLSSNHALQRMKRCYQAQKAGHTGTLDPLATGMLPICFGE
ATKFSRFLLDTDKCYQTVATLGERTDTLDSEGEVIESVPVKMTETDIIGILPNFRGEITQ
IPPMYSALKQDGRPLYKLARQGIEVERAARDVTVYELELMTLKQDQAKLKGQFQVHCSKG
TYIRSLVDDIGQVLGCGAHVSELRRTNVAHFSEEQLVPWSVIERLAKQGDLAGLDAYLLP
IESMLQGMPELRLTAEMAYYMGTGRPVSLNTQQAIGAYVCVFDEKAHQFIGVAEVVAENQ
LKAVRLLATKVSNC
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgtaacaagggccgagcgctaaacggcattttattgctggataagccgact
gggctaagctcaaatcatgccttgcagcggatgaagcgttgttatcaagcacaaaaagcg
ggccatactggaacgttagatcctttagctacggggatgttgccgatttgttttggtgag
gcgactaagttttcacgttttctgcttgataccgataaatgttatcaaactgttgcgacc
ttgggtgagcgtacagacacgcttgatagtgaaggtgaggtgatcgagtctgtgccggtt
aagatgactgagaccgatattattggcatattgccaaatttccgcggtgaaatcacacaa
attccgcctatgtattcggccttaaagcaagatggtcggccgttatataaactcgcacgc
caagggattgaggttgagcgcgctgctcgtgatgtaacggtttatgagctagagctgatg
acattaaagcaagatcaggctaaattgaaagggcaatttcaggtgcactgtagcaaaggg
acctatattcgcagtctcgttgatgatatcggtcaggtattaggctgtggtgctcatgtt
agtgagttgcgccggactaacgtggctcattttagtgaagagcagctcgtgccttggtct
gtgatagaacgccttgctaaacaaggtgatttagccggcttagatgcttatttattgccg
atagagtcaatgttgcagggcatgccagaattgcgcttaacagcagaaatggcgtactat
atgggcacgggacggcccgtttctttaaatacacaacaagcgattggtgcttatgtttgt
gtgtttgatgaaaaagcgcaccaattcataggtgtcgctgaagttgtggcagagaatcag
ctcaaagcagttcgattgttggctacaaaagtaagtaattgctag
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