Piscirickettsia salmonis: PSLF89_2842
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Entry
PSLF89_2842 CDS
T03982
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
psal
Piscirickettsia salmonis
Pathway
psal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSLF89_2842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psal03400
]
PSLF89_2842
Enzymes [BR:
psal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSLF89_2842
DNA repair and recombination proteins [BR:
psal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSLF89_2842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
RecG_dom3_C
SNF2-rel_dom
tRNA_anti-codon
AAA_30
IMS_HHH
AAA_16
Zeta_toxin
AA9
SLFN-g3_helicase
Helicase_RecD
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKP74411
LinkDB
All DBs
Position
complement(2222989..2225097)
Genome browser
AA seq
702 aa
AA seq
DB search
MINHELPLAGLKGVGPKLLGKLEQLGIYSLTDLLLHLPFRYEDHTRLTSAADMIPGEFIV
IFGQVSSSQALRKGGLIAQLVTEQNKSEIAICFFKAFGRVHSVFSQGQWVLCAGILREND
FGYELVHPEWKSASNGQLPMLETHLRPVYRSCEGFAQASLRRIIDQALMLLQQGHIHCSS
LSSLYSEKLSICLPDLVDAILYLHRPDTHCDKKALEERYHPAWQALLVDELLTHQLSLYH
ARCELDQQQAQVIAYCKQQEQQFLENLPFHLTQAQSRVSQEIYDDLARSRPMQRLVQGDV
GAGKTVVAALAILAAVKYGQVVVLAPLEVLATQHYQTLQCWLMPFGISTVLLSGRLKKKA
REQVLLDIKCAESQVIVGTHALLQDDVEYADLNLVIIDEQHRFGVEQRSLLSQQASKKGK
MPHQLFMTATPIPRTLAMTLYADLDVSLLDEVPAGRRPIKTIALANQRRHEVIARVRENC
MNGQQAYWVCTLIEVSESPTSLESSRLPGQAAQALKKILDKELPGLNVGLVHGRLSANEK
NQLLTDFKGHKLDVLVATTVIEVGVDVPNASLMVIENPERLGLAQLHQLRGRVGRGSAQS
YCVLMYQAPLSEQGYQRLDVLRESSDGFYIAEQDLLLRGPGDLLGARQTGDLAFRFVDLS
RDDYLVRFIKSHDIDFLNLIKEEELRAAKERWLSRKSDAALM
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaatcacgaattgcctttagcgggtttaaaaggagtggggcctaaattattaggg
aaacttgagcaacttggcatctactcactcactgatttgttattacacctaccttttcgt
tatgaagatcatacacgtctaacttctgctgcagatatgattccgggtgagtttattgtc
atctttggtcaagtgagttctagtcaggctttaagaaaaggtggactgattgcacagtta
gtaactgagcagaataaaagtgagattgctatttgtttttttaaggcttttggtcgtgtg
cacagtgtattttcccaagggcaatgggtcttgtgtgcgggtattttaagagaaaatgac
tttggttatgaactggtgcaccctgaatggaaaagtgcaagtaatggtcagttgccgatg
ctagaaacccacttacgacccgtctatcgtagttgtgaaggttttgctcaggcgagcttg
cgccgtatcattgatcaggcgcttatgctgttgcagcaaggtcatattcattgctcaagc
ttatcttctttatatagtgaaaaactaagcatatgcttgcctgacttagttgatgcaatt
ttatatttacataggccagatacccactgtgataaaaaagcgttggaagagcgttaccac
cctgcttggcaagcactgttggttgatgagttacttacgcaccaattaagcttgtaccat
gcgcgttgtgagctggatcagcaacaggctcaagttattgcgtactgtaagcagcaagaa
caacagtttttagagaatttaccttttcatttaacgcaagcgcagtctcgagtgagccag
gaaatctatgatgatcttgcacgatctcggccgatgcaacgccttgtccaaggggatgtg
ggggcaggtaaaacagtggttgcggcattggcgattttagcagcggtaaaatatggtcaa
gtggtagtgttagcgcctttggaggtgttggcaactcagcactatcagacattacagtgc
tggttgatgccttttggaataagcactgttttattatcaggtcgtttaaaaaagaaagcg
cgtgagcaggtactactagatattaagtgcgcagagagccaggttattgttggaacacat
gcactattacaagacgatgtggagtatgctgatcttaatctagtgattattgatgagcaa
catcgttttggtgtcgaacagcgcagcttattaagtcagcaggcgagtaagaaagggaaa
atgccgcatcagctttttatgacagcaacgccgattccgcgaacgttggcgatgacgctc
tatgctgatttggatgtgtcgttattggatgaggtgccagcaggccgccgcccgataaaa
accatcgctcttgctaatcaacgtcgtcatgaagtgattgcacgcgttagagaaaattgt
atgaatgggcagcaggcgtattgggtctgtactttaattgaagtgtctgaaagccctaca
agtttggaaagttctcggttgccaggacaggcggcacaagcactaaaaaaaatattagat
aaagaattaccaggattaaacgtgggtttggtgcatggacgactgagtgcgaatgagaag
aatcagctgcttactgattttaaaggacataaattagatgtgttagttgcaaccacggtg
attgaagtgggggtggatgtgccgaatgccagtttgatggtgattgaaaatcctgagcgt
ttgggcttggctcagttacatcagttgcgtgggcgtgttgggcgtggttcggcgcaaagt
tattgtgtgctcatgtaccaagcgcccctttcagagcaaggttatcagcgtttggatgta
ttacgtgagagcagcgatggcttttatattgctgagcaggatttattattgcgcggcccg
ggtgatttattgggggcaaggcaaacaggagaccttgcctttcgctttgttgatttaagc
cgtgatgactatttggttcgatttattaagagccatgatattgattttttaaatctgatt
aaggaagaagaattgcgcgctgcaaaagaacgctggttgtctcgtaaaagcgatgcagca
ttaatgtag
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