Piscirickettsia salmonis: PSLF89_3185
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Entry
PSLF89_3185 CDS
T03982
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psal
Piscirickettsia salmonis
Pathway
psal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSLF89_3185 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psal03019
]
PSLF89_3185 (groEL)
03110 Chaperones and folding catalysts [BR:
psal03110
]
PSLF89_3185 (groEL)
03029 Mitochondrial biogenesis [BR:
psal03029
]
PSLF89_3185 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psal04147
]
PSLF89_3185 (groEL)
Enzymes [BR:
psal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSLF89_3185 (groEL)
Messenger RNA biogenesis [BR:
psal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSLF89_3185 (groEL)
Chaperones and folding catalysts [BR:
psal03110
]
Heat shock proteins
HSP60 / Chaperonin
PSLF89_3185 (groEL)
Mitochondrial biogenesis [BR:
psal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSLF89_3185 (groEL)
Exosome [BR:
psal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSLF89_3185 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PSLF89_3185 (groEL)
Exosomal proteins of breast cancer cells
PSLF89_3185 (groEL)
Exosomal proteins of colorectal cancer cells
PSLF89_3185 (groEL)
Exosomal proteins of bladder cancer cells
PSLF89_3185 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKP74681
LinkDB
All DBs
Position
complement(203824..205485)
Genome browser
AA seq
553 aa
AA seq
DB search
MSAKEVRFGTGSRQKMLDGVNLLANAVKVTLGPRGRNVILEKSFGAPTITKDGVSVAKEI
ELSDKFENMGAQMVKEVASKSNDDAGDGTTTATVLAQAIIQEGVKSVAAGMNPMDLKRGI
DKATIAAVAALKDLSTPCTDNKAIAQVGTISANSDEEIGSIIAKAMEKVSTDGVITVEEG
SSLENELDVVEGMQFDRGYLSPYFVNKQEKMIAEIESPFILLVDKKISNIRELLPTLESV
AKSGKPLFIIAEDVEGEALATLVVNNIRGIVKVCAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEVGLDLEKATLEHLGTAKRIVVTKDNTTVIDGAGEQTAIEARVTQIRAQVEETSSDY
DREKLQERVAKLSGGVAVIKVGAATEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAMAAVKALDFANDEQAQGANILLRAMSAPLRQIVENAGSEAAVILDKIVNGEGNFGYNA
ATNEFGDMIEMGILDPTKVTRSALQNAASIAGLMITTEAMVAELPKEDSAGGAGMPDMGG
MGGMGGMGGMGMM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaagaagtgcgcttcggtaccggttcccgtcaaaaaatgttggacggtgtt
aacctacttgcaaatgcagtgaaagtcactctaggtccacgcggacgcaacgttatttta
gaaaagtcatttggtgccccaaccatcactaaagatggtgtatctgttgccaaagaaatc
gagcttagcgataagttcgaaaacatgggcgcacaaatggtcaaagaagtcgcatctaaa
tcaaatgatgatgcaggtgacggtacgacaacggcgacagtattagcacaagcaattatt
caagaaggcgtgaagtctgttgctgccggcatgaacccaatggacctaaaacgcggcatc
gataaagccactatcgctgcagttgctgcattaaaagacttatctacaccgtgcacagac
aacaaagccattgctcaagtcggtacaatttcagcaaactctgatgaagaaattggctct
atcattgctaaagcgatggaaaaagtatctaccgacggcgtaatcactgttgaagaaggc
tctagccttgaaaacgaattagatgttgttgaagggatgcaattcgatcgcggttacctc
tctccatattttgtcaacaaacaagagaaaatgatcgctgaaatcgaaagcccatttatc
ttactcgtcgacaagaaaatttctaacattcgcgaattactacccacattagaatcagtt
gctaaatcaggcaagccattattcatcatcgctgaagatgttgaaggtgaagctctggca
acactcgtcgttaataacattcgcggtattgttaaagtgtgcgcagtaaaagcacctggc
tttggtgatcgtcgtaaagcgatgcttgaagatattgccatcttaactggcggtactgta
atctctgaagaagttggcctagaccttgagaaagcaactcttgagcacttaggtacagca
aaacgcatcgtcgtcactaaagacaatacaaccgttattgatggtgcgggtgaacaaact
gcgatcgaagctcgcgttactcaaatccgtgcacaagttgaagaaacatcctctgactac
gaccgcgagaaactgcaagagcgtgtcgctaagctatctggtggtgttgctgtcattaaa
gttggcgcagcgactgaaatcgagatgaaagagaagaaagaccgcgttgatgatgcactg
catgcaacacgcgccgcagttgaagaaggtgtggttcctggtggtggtgttgcactggtt
cgtgcaatggctgcagttaaagctcttgacttcgcaaatgatgaacaagcccaaggtgct
aacatcttgttgcgtgctatgagcgcaccattacgtcaaatcgttgagaacgcaggtagc
gaagcggctgtaattcttgataaaattgtcaacggtgaaggtaactttggttataatgca
gcaaccaatgagtttggtgatatgatcgaaatgggtattcttgacccaactaaagtcaca
cgttctgcacttcaaaatgcagcttctatcgcaggtcttatgatcacaacagaagcgatg
gttgcagagcttcctaaagaagactctgcaggtggtgctggcatgccggatatgggtggc
atgggcggtatgggtggtatgggtggtatgggcatgatgtaa
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