Piscirickettsia salmonis: PSLF89_3276
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Entry
PSLF89_3276 CDS
T03982
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psal03021
]
PSLF89_3276
Transcription machinery [BR:
psal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSLF89_3276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AKP74760
LinkDB
All DBs
Position
complement(115450..116328)
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AA seq
292 aa
AA seq
DB search
MTQTTLLTNSNKALMLTPGSNLDTFIHNVNQVPMLSPEEELALAQEYHEHQNIEAARRLV
MAHLRFVVKIARGYAGYGLAQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIH
EFIIRNWRIVKVATTKAQRKLFFSLRSQKKRLGWFNQAEVESVAADLGVPAKTVVEMEAR
LSAHDAVIAPTSPEEGESTGAAQPSYLEDTNAMNNPALALEHDNWQSNQENKLLQAISIL
DERSRDILQQRWLNEENKATLHELAAKYQVSAERVRQLEKSALKKLRKSMTE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaactacactactgacaaatagtaataaagcactgatgctaacacctggcagc
aacctcgatacatttatccataatgtcaatcaggtgccaatgctaagcccagaggaagag
cttgcgctcgctcaggaataccatgagcatcaaaatatcgaagcggcgcgcagactagtg
atggcacacttgcgtttcgttgttaaaattgctcgtggctatgcaggctatggtcttgct
caagcagacctcattcaagaaggcaatattggcttaatgaaagcggtaaaacgttttgac
ccaagtgtcggcgtacgcttagtctcctttgctgtccattggattaaagctgaaatacat
gaatttattattcgcaactggcgcattgttaaagttgcaaccacgaaagcacaacgcaaa
ctctttttttccttgcgctcacaaaaaaaacgccttggctggtttaatcaagcagaagtt
gaatccgttgctgctgatttaggtgtccctgcaaaaaccgtggttgaaatggaagcacgc
ttaagcgcacatgatgctgtgattgctcctacaagcccggaagaaggggaaagcacgggt
gcggctcaacctagctaccttgaagatacaaatgccatgaataacccagcgttagcgctg
gagcatgataactggcaatctaaccaagaaaataagctcttacaagctatttcaattctg
gatgagcgtagtcgcgacatcttgcaacagcgctggctaaatgaagaaaacaaagctaca
cttcatgaactagcggcgaagtaccaagtatcggctgagcgtgtacgccaacttgagaaa
agcgccttaaagaaactacgcaaatcaatgacggaataa
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