Piscirickettsia salmonis: PSLF89_3278
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Entry
PSLF89_3278 CDS
T03982
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psal02000
]
PSLF89_3278
Transporters [BR:
psal02000
]
Other transporters
Pores ion channels [TC:
1
]
PSLF89_3278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
Opacity
PagL
Porin_4
DUF2490
DUF748
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
AKP74762
LinkDB
All DBs
Position
114154..115158
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AA seq
334 aa
AA seq
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MIMMRKTTMKISKVACSLAVAVLALPLASFAVSQSGQFFATPSIGSGWFDSDRQVSNEPV
LNLSLGYNITDNIAVALSYAHASNKDDVTGNSASMNQMRIDGLYRFMAKSPLQPYLLAGI
GRQNLKGSNSFLDYGVGLTYDFMPNVALDVGVRRQYQLGTYHRNDTIAAVGIQFSFGPHG
SAFSADDSFDQNEIAPAPMPEQAAPPAPAPEAAAPVNPCTVPVNEVAISFASTSDMVSSK
YDCQLSRIAAFLSANPKSSAMIKGYADSSGSPNYNNQGLSQRRAESVKDYLVTQKSINSH
RLITQALGTENPVATNKTVEGRAKNRRVDVTTIK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatgaggaaaacgacaatgaagatctctaaggttgcgtgtagccttgctgtt
gcagtgcttgcactaccacttgcaagctttgccgtaagtcaaagtggccagttttttgcg
acgcccagtatagggagtggttggtttgactcagatcgccaagtgagtaatgagccagta
ctaaatttgagtttgggctataacattactgataatattgctgttgccttatcgtatgca
catgcaagtaataaagatgatgtgactggcaactctgcgagtatgaaccaaatgcgtatt
gatggtttgtatcgttttatggcaaagagccctcttcagccttacttgcttgctggaatc
ggtcgccagaacttaaaaggctccaatagtttcttagactatggtgtgggtttaacgtat
gactttatgccaaatgttgcattagatgtaggtgtgcgtcgtcagtatcaattaggtacg
taccatcgtaatgatacgattgctgcagtgggaatacagtttagttttggtccgcatggc
agtgcatttagtgcagatgatagctttgatcaaaatgaaatcgcccctgcgcctatgcct
gaacaagctgcgccgccagcgccagcacctgaggcagctgcacctgtaaatccttgtaca
gtaccggtgaatgaggtcgcaattagttttgcttcaaccagtgatatggtatcgtcaaaa
tatgattgtcagttaagccgtattgctgcgtttttaagcgcaaatccaaaaagttccgca
atgattaaaggttatgcggacagcagtggtagcccaaattataataatcagggtttatca
cagcgtcgggctgagagtgtgaaagattacttagtaactcaaaaaagcattaatagccac
cgcttaattactcaggcattgggtactgaaaacccggttgcaacgaataaaacagtagaa
gggcgtgctaaaaatcgtcgtgttgatgtgacgacaatcaaataa
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