Piscirickettsia salmonis: PSLF89_445
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Entry
PSLF89_445 CDS
T03982
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psal03032
]
PSLF89_445
03036 Chromosome and associated proteins [BR:
psal03036
]
PSLF89_445
03400 DNA repair and recombination proteins [BR:
psal03400
]
PSLF89_445
DNA replication proteins [BR:
psal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSLF89_445
Chromosome and associated proteins [BR:
psal03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PSLF89_445
DNA repair and recombination proteins [BR:
psal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PSLF89_445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
STAT_bind
Motif
Other DBs
NCBI-ProteinID:
AKP72598
LinkDB
All DBs
Position
2773792..2774121
Genome browser
AA seq
109 aa
AA seq
DB search
MTRSELIEHIAKRQNQFDDIKIEQIVRLILDQMAQSLIKNQRIEIRGFGSFSLHKRDPRK
ARNPKTGESVVTEPKHAIHFKPGKSMRERVDQSKNIYPIQEDKDDDHDD
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgacacgatctgagcttattgaacacattgcaaaacgacaaaatcagtttgatgatata
aaaatagagcaaatagtcagattgattcttgaccaaatggctcagtcacttattaaaaat
caacgcattgaaatacgtggatttggtagtttttctttacataagcgggacccacgcaaa
gctcgcaaccctaaaacaggtgaatctgtcgtcactgaacctaagcatgcaattcacttt
aaacctggaaaatccatgcgtgagcgtgttgatcaatctaagaatatctatccaattcaa
gaagataaagatgatgatcatgatgattga
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