Piscirickettsia salmonis: PSLF89_65
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Entry
PSLF89_65 CDS
T03982
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psal
Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psal03032
]
PSLF89_65
03400 DNA repair and recombination proteins [BR:
psal03400
]
PSLF89_65
Enzymes [BR:
psal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSLF89_65
DNA replication proteins [BR:
psal03032
]
Prokaryotic type
DNA Topoisomerases
PSLF89_65
DNA repair and recombination proteins [BR:
psal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSLF89_65
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Rhabdo_M1
Motif
Other DBs
NCBI-ProteinID:
AKP72278
LinkDB
All DBs
Position
3113322..3115643
Genome browser
AA seq
773 aa
AA seq
DB search
MGNKLVIVESPAKGKTINKYLGKDFQVMASYGHVRDLLPKEGAVQPEHDFSMTYQLTERG
EKSINDIIKALRQSTDLYLASDPDREGEAIAWHLLEELKARGELEGKTVHRVVFYEITER
AVQDAINNPREVAMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRMIV
EREQEIQAFKSKEYWTIASDLIHDQQAFSAKLTLHNNEKVKQFTFTNEKAATKAQQTLIK
KANNILKVVNVEKKQRKRNPAAPFTTSTLQQEAVRKLGFSAQRTMRTAQQLYEGIATGDG
TVGLITYMRTDSVYLADEAITELRELIVDRYGQEALPKSPRAFKSKAKNAQEAHEAVRPT
SCMRLPKELKPHLSTDQFKLYELIWKRTVACQMQHALIDTVAVDLACGDEKHLFRANGSQ
IAKPGFLSVYEESKDDDKEDDDKRWLPIMKTGESIQLLEIKADQHFTEPRPRYTEATLIK
TLEEHGIGRPSTYTAILSTLQQREYIELDKKRFQPTDVGNVVNKFLTKYFEKYVDYEFTA
HLEDDLDAISRGEKQWKPLMHDFWSPFQDQVKTIDETVQRKDVTQEELDEDCPKCSAKLS
ERLGRRGKFIGCTNYPECDYTRSLDGEEQAAPEKVDDRQCPKCDSDLYIRQGRYGKFIGC
SNYPKCKFIEPLEKPTETGVECPECKQSHLVQRRSRYGKIFYSCNRYPDCKYAVWNEPLK
ESCPTCQWPILTIKTTKRWGTEKVCPQKECGFKAPYELPESEQTEQQSTEEKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacaaattagtcattgtcgaatctcccgctaagggaaaaaccatcaataagtat
ctaggcaaagatttccaagtcatggcatcctatggccatgtccgagatctactgcctaaa
gaaggtgctgtacagcctgaacacgatttttctatgacataccagcttactgagcgcggt
gaaaaaagcatcaatgatatcattaaagctttacgtcaatccactgatctttatctagca
tcagaccctgatcgtgaaggtgaagccattgcttggcacctgctcgaagagctcaaagca
cgcggcgaacttgaaggcaaaactgtccatcgtgtcgtcttctatgaaattaccgaacgt
gccgttcaagatgcgattaataatccacgtgaagtcgctatggacctagtcgatgcccaa
caagcacgccgagcgcttgactatctcgttggctttaatctatcacccttgttatggaaa
aaaattcgccgcggcctctctgcaggacgagtacaaagcccggcactacgcatgattgtt
gagcgtgagcaagagattcaagcctttaaatcaaaggaatattggacgatcgcctctgac
ctcattcatgatcaacaagcattttcagccaagttaaccttgcataacaacgaaaaagta
aaacaatttacatttactaacgaaaaagctgcaactaaagcacagcaaacgctcataaaa
aaagcgaataatatacttaaagttgtcaacgttgaaaagaaacaacgtaaacgtaatcca
gctgcgccttttacaacctcgaccttacagcaagaagctgtacgtaaactcggcttctcc
gctcagcgcaccatgcgcactgcccagcaattatacgaaggaatagcaactggcgatggc
accgtcggtttaattacttatatgcgtacagattccgtctatttagcggatgaagcgatt
acagaattgcgtgagctgattgtcgaccgttacggccaagaggccttaccaaagtcaccg
cgggcatttaagtccaaagcaaaaaatgctcaagaagctcacgaagctgtccgcccaacc
tcatgcatgcgcttgcctaaagaacttaagccgcatttatccactgatcaatttaagctc
tatgagctgatttggaagcgcacagtggcctgtcaaatgcaacacgcccttattgatact
gtggctgttgatctggcctgtggtgatgaaaagcatctatttcgtgctaatggttcacaa
attgccaaacctggcttcttgtccgtctatgaagaaagcaaagatgatgataaagaagat
gacgacaagcgctggctaccaataatgaaaacaggtgagtcaattcagctactcgagatt
aaagccgatcaacactttactgagccacgaccacgttatactgaagcaacactaattaag
acactagaagaacatggcattggccggccttccacctatacggccattttatctacgctg
caacaacgtgaatatatcgaacttgataaaaagcgttttcaaccgacagatgtcggcaat
gtcgtcaataaattcttgacaaagtactttgaaaagtacgtagattatgagtttaccgcc
cacttggaagacgatcttgatgcgatttcacggggtgaaaagcaatggaaaccactgatg
catgatttttggagcccattccaagatcaagtcaagactattgatgaaaccgtccaacgt
aaagatgtcacccaagaagaactggatgaggattgtccaaaatgtagcgctaaactctct
gaacgcctcggccgtcgtggtaaatttattggctgtaccaattatccagagtgtgactat
actcgcagtcttgatggtgaagaacaagcagcccctgaaaaagtagacgaccgtcaatgt
ccaaagtgcgacagtgatctttacattcgtcaaggtcgctatggcaaatttatcggctgt
agtaattacccaaagtgtaaatttattgagcccttagaaaagcccactgaaacgggtgtt
gagtgtccagagtgcaagcaaagccatttagttcagcgccgctcacgctatggtaaaata
ttttactcctgcaatcgctacccggattgtaaatatgcagtttggaatgaacctttaaaa
gaaagttgcccaacctgccaatggcccattttaacgattaaaacaacaaaacgttggggc
accgaaaaagtctgtccacaaaaagagtgcggctttaaagccccttatgaactgcccgaa
tcagaacaaacagaacagcaaagcacagaagaaaaaaaataa
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