Piscirickettsia salmonis: PSLF89_880
Help
Entry
PSLF89_880 CDS
T03982
Name
(GenBank) AAA family ATPase
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psal
Piscirickettsia salmonis
Pathway
psal02020
Two-component system
psal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSLF89_880
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSLF89_880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psal03000
]
PSLF89_880
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psal02035
]
PSLF89_880
Transcription factors [BR:
psal03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSLF89_880
Bacterial motility proteins [BR:
psal02035
]
Flagellar system
Flagellar assembly proteins
Others
PSLF89_880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
FleQ
AAA_16
Mg_chelatase
AAA_3
bpMoxR
DUF5788
AAA_19
AAA_7
IstB_IS21
HTH_30
HTH_50
UBN_AB
Motif
Other DBs
NCBI-ProteinID:
AKP72946
LinkDB
All DBs
Position
395081..396577
Genome browser
AA seq
498 aa
AA seq
DB search
MLKQRVVIVSQCQVSANELKLLFEFMGENVAVCLNNDDWTMLLHDNDPLLLCVAHDALSH
VFALYHELKHQNKIACECRFVVVAEPERIKRHYSAKELKNVCGYLVKPYRYAQLEQVLDN
VQTAQTANEERLAAGRSEVQDELNQLLVGKSRAIRRVRQLIRQVAKSEVNVLILGCSGTG
KEVVSQAIHRASVRAQQAFVPVNCGAIPADLLESELFGHEKGAFTGAIASRQGRFELAQK
GTLFLDEIGDMPLNMQVKLLRVLQERTFERVGSNKALECDVRVIAATHRNLEELIEEGLF
REDLFYRLNVFPIEMPSLAERSEDIPLLIKELVSRIQREGRGRIRFTAEALARLKNYHWP
GNVRELANLVERLTVSYANRWVDVPQLPPKFLTAEDIEACNALDESDGPLYEETAPIDPI
DIEANMVGPSTVHLPGEGVDLKSYLTTIEANLIQAALDQSNGVVAHAAKRLSIRRTTLVE
KIRKLNLAGNQSEELSKA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcagagagtggttattgttagtcaatgtcaagtaagtgctaatgagttaaaa
ttactttttgaatttatgggtgagaatgttgccgtctgtttaaataatgatgattggaca
atgttactgcatgacaatgacccattattattatgtgtggcgcacgatgctttaagtcat
gtgtttgcactgtatcacgaattaaagcaccaaaataaaatcgcttgtgagtgtcgtttt
gtggttgtggcggagcctgagcgaatcaagcgtcattatagtgctaaagagcttaaaaat
gtttgtggttacttggttaagccttatcgctatgcgcagttagagcaggtcttagataat
gttcaaacagctcaaacagccaacgaagagcgtctagcggcagggcgcagtgaagtgcaa
gatgagttgaatcaacttttagtgggtaagagccgtgctattcggcgagttcgtcagctg
attcggcaagtggcgaagtctgaggtgaatgtattgattttaggatgctctggcacgggt
aaggaagtggtatctcaggcgattcatcgtgcttctgtgcgagctcagcaagcgtttgtg
ccggtaaattgtggtgcaattccagcagatttactggagagtgagttatttggtcatgaa
aaaggggcgtttaccggagcgattgcaagccggcaggggcgttttgaactggcgcaaaaa
ggcacgctatttttagatgaaatcggtgatatgccgttaaacatgcaggtaaaattactg
cgagtattgcaagagcggacctttgagcgtgttggcagtaataaagcactagagtgcgat
gtccgtgtgattgctgcaacgcacaggaatcttgaagagttgattgaagaaggcctattt
cgtgaggatttattttatcgcttaaatgtctttccgattgaaatgccatcattagctgag
cgcagtgaagatattccgttattgattaaagagctcgttagccgtattcagcgtgaaggg
cgtggtaggattcgctttaccgctgaggctttggcacgtttaaaaaattatcattggcct
ggtaatgtacgtgagttggcaaatttagttgagcgtttgacggtcagctatgccaatcgt
tgggtggatgtgccgcaattgccccccaaatttttaactgcagaagatatcgaagcgtgt
aatgcgcttgatgagagtgatggtccgttgtatgaggaaactgcacctatagatcctatc
gatatagaagcaaatatggtcggaccatcgactgtgcacttgcctggcgaaggcgtagat
cttaaatcatatttaacgacaatcgaagcgaatttaattcaagcggccttggatcaatcc
aatggtgtggtcgctcatgcggcgaagcgcttgtcgattcggcggacaacattggttgag
aaaatacgcaagcttaatttagctggcaaccaaagcgaagagctgtcaaaagcctga
DBGET
integrated database retrieval system
